Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 AC087623.4-201ENST00000606593 695 ntBASIC6.99□□□□□ -1.29
CCNB1IP1Q9NPC3 AP002856.2-202ENST00000606885 755 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CCNB1IP1Q9NPC3 AL133520.1-201ENST00000610430 700 ntBASIC6.99□□□□□ -1.29
CCNB1IP1Q9NPC3 MIR7162-201ENST00000611134 69 ntBASIC6.99□□□□□ -1.29
CCNB1IP1Q9NPC3 AC239803.3-201ENST00000614663 494 ntTSL 3 BASIC6.99□□□□□ -1.29
CCNB1IP1Q9NPC3 AC243654.1-201ENST00000620218 293 ntTSL 2 BASIC6.99□□□□□ -1.29
CCNB1IP1Q9NPC3 AL356599.1-202ENST00000626919 218 ntTSL 5 BASIC6.99□□□□□ -1.29
CCNB1IP1Q9NPC3 AC104162.1-201ENST00000430831 2382 ntBASIC6.99□□□□□ -1.29
CCNB1IP1Q9NPC3 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC6.99□□□□□ -1.29
CCNB1IP1Q9NPC3 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
CCNB1IP1Q9NPC3 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
CCNB1IP1Q9NPC3 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CCNB1IP1Q9NPC3 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CCNB1IP1Q9NPC3 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CCNB1IP1Q9NPC3 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CCNB1IP1Q9NPC3 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC6.99□□□□□ -1.29
CCNB1IP1Q9NPC3 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CCNB1IP1Q9NPC3 AC053481.2-201ENST00000602493 1815 ntTSL 5 BASIC6.99□□□□□ -1.29
CCNB1IP1Q9NPC3 RAD51B-212ENST00000488612 1550 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CCNB1IP1Q9NPC3 FO393401.2-201ENST00000422009 1307 ntTSL 5 BASIC6.99□□□□□ -1.29
CCNB1IP1Q9NPC3 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 LINC02071-201ENST00000514726 1723 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 FAM49A-201ENST00000381323 4670 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 LDHA-201ENST00000227157 1887 ntTSL 3 BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 RHOJ-201ENST00000316754 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 AC061975.7-201ENST00000592016 2692 ntBASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 EPS15P1-202ENST00000459691 2071 ntBASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 OR4D6-201ENST00000300127 1054 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 FAM177B-201ENST00000360827 764 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 FARP1-202ENST00000376581 1021 ntTSL 2 BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 MIR640-201ENST00000385086 96 ntBASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 MS4A6A-201ENST00000412309 1284 ntTSL 2 BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 C14orf2-202ENST00000414262 842 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 AC092042.2-201ENST00000417304 331 ntBASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 GRM8-206ENST00000444921 1251 ntTSL 3 BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 DEFA11P-201ENST00000446470 261 ntBASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 AP003774.3-201ENST00000457725 985 ntTSL 2 BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 RN7SL751P-201ENST00000473281 284 ntBASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 RPL7AP26-201ENST00000488538 813 ntBASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 AC116353.1-201ENST00000489727 316 ntBASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 RPL7AP2-201ENST00000496515 740 ntBASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 AC027607.1-201ENST00000503034 534 ntTSL 3 BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 AC008638.2-201ENST00000503840 715 ntBASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 TRIM6-211ENST00000515022 1060 ntTSL 2 BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 SNORA70.23-201ENST00000517218 151 ntBASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 PRR13-207ENST00000549581 838 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 APOC2-202ENST00000585786 880 ntTSL 2 BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 LINC01255-203ENST00000587189 591 ntTSL 4 BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 LINC00663-205ENST00000589508 432 ntTSL 3 BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 EDRF1-AS1-205ENST00000601363 712 ntTSL 5 BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 AL109933.4-201ENST00000612111 157 ntBASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 AC123788.2-201ENST00000612290 283 ntBASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 CR392039.3-201ENST00000623236 227 ntTSL 5 BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 AC093495.1-212ENST00000630173 1162 ntTSL 5 BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 AC073488.5-201ENST00000631993 754 ntBASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 AC068205.4-201ENST00000637880 804 ntBASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 FBN2-203ENST00000507835 1884 ntTSL 5 BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 AL512604.2-201ENST00000426946 1314 ntTSL 5 BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 AC126773.4-201ENST00000612545 3043 ntBASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
CCNB1IP1Q9NPC3 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CCNB1IP1Q9NPC3 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CCNB1IP1Q9NPC3 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
CCNB1IP1Q9NPC3 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
CCNB1IP1Q9NPC3 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
CCNB1IP1Q9NPC3 TMC1-202ENST00000340019 3068 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms