Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 LINC01284-201ENST00000442994 730 ntTSL 5 BASIC7.85□□□□□ -1.15
SLC1A1P43005 AL441992.1-201ENST00000443631 544 ntTSL 2 BASIC7.85□□□□□ -1.15
SLC1A1P43005 ANAPC10-202ENST00000451299 928 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SLC1A1P43005 AL591438.2-201ENST00000452635 691 ntBASIC7.85□□□□□ -1.15
SLC1A1P43005 RPL10P6-201ENST00000457497 318 ntBASIC7.85□□□□□ -1.15
SLC1A1P43005 AC093821.1-201ENST00000503950 539 ntTSL 4 BASIC7.85□□□□□ -1.15
SLC1A1P43005 AC146944.2-201ENST00000504546 1073 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
SLC1A1P43005 AC139495.1-201ENST00000510264 1073 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
SLC1A1P43005 AC233724.10-201ENST00000510454 409 ntBASIC7.85□□□□□ -1.15
SLC1A1P43005 SNX18P27-201ENST00000523611 779 ntBASIC7.85□□□□□ -1.15
SLC1A1P43005 SPINT1-AS1-204ENST00000568419 629 ntTSL 3 BASIC7.85□□□□□ -1.15
SLC1A1P43005 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC7.85□□□□□ -1.15
SLC1A1P43005 AC100843.2-201ENST00000589084 324 ntTSL 5 BASIC7.85□□□□□ -1.15
SLC1A1P43005 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC7.85□□□□□ -1.15
SLC1A1P43005 CTSLP2-202ENST00000626319 1104 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
SLC1A1P43005 AC233280.20-201ENST00000637412 416 ntBASIC7.85□□□□□ -1.15
SLC1A1P43005 CASC19-212ENST00000641153 1287 ntBASIC7.85□□□□□ -1.15
SLC1A1P43005 REG1CP-205ENST00000444841 1710 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
SLC1A1P43005 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SLC1A1P43005 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
SLC1A1P43005 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC7.85□□□□□ -1.15
SLC1A1P43005 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC7.85□□□□□ -1.15
SLC1A1P43005 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SLC1A1P43005 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
SLC1A1P43005 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC7.85□□□□□ -1.15
SLC1A1P43005 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
SLC1A1P43005 CCDC162P-202ENST00000368966 6751 ntBASIC7.85□□□□□ -1.15
SLC1A1P43005 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SLC1A1P43005 GABRR3-202ENST00000472788 1416 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
SLC1A1P43005 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SLC1A1P43005 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
SLC1A1P43005 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
SLC1A1P43005 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SLC1A1P43005 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
SLC1A1P43005 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SLC1A1P43005 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC7.84□□□□□ -1.15
SLC1A1P43005 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
SLC1A1P43005 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SLC1A1P43005 AL133320.1-201ENST00000621423 2352 ntBASIC7.84□□□□□ -1.15
SLC1A1P43005 CAP1-201ENST00000340450 2592 ntAPPRIS ALT1 TSL 5 BASIC7.84□□□□□ -1.15
SLC1A1P43005 AC069222.1-201ENST00000608028 3360 ntBASIC7.84□□□□□ -1.15
SLC1A1P43005 AL627309.5-203ENST00000466557 1301 ntTSL 5 BASIC7.84□□□□□ -1.15
SLC1A1P43005 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC7.84□□□□□ -1.15
SLC1A1P43005 ELF5-201ENST00000257832 2321 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
SLC1A1P43005 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SLC1A1P43005 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
SLC1A1P43005 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
SLC1A1P43005 OR2T10-201ENST00000330500 1049 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
SLC1A1P43005 SNORA55-201ENST00000364587 135 ntBASIC7.84□□□□□ -1.15
SLC1A1P43005 FARP1-202ENST00000376581 1021 ntTSL 2 BASIC7.84□□□□□ -1.15
SLC1A1P43005 RPL23AP7-201ENST00000391616 738 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SLC1A1P43005 RN7SKP168-201ENST00000410910 300 ntBASIC7.84□□□□□ -1.15
SLC1A1P43005 SPCS1-202ENST00000423431 822 ntTSL 3 BASIC7.84□□□□□ -1.15
SLC1A1P43005 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC7.84□□□□□ -1.15
SLC1A1P43005 LINC01811-202ENST00000424786 787 ntTSL 5 BASIC7.84□□□□□ -1.15
SLC1A1P43005 AC068137.1-201ENST00000429272 584 ntBASIC7.84□□□□□ -1.15
SLC1A1P43005 DDX11L10-201ENST00000430178 571 ntBASIC7.84□□□□□ -1.15
SLC1A1P43005 HMGN2P24-201ENST00000433516 273 ntBASIC7.84□□□□□ -1.15
SLC1A1P43005 AC098483.1-202ENST00000436515 967 ntTSL 2 BASIC7.84□□□□□ -1.15
SLC1A1P43005 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC7.84□□□□□ -1.15
SLC1A1P43005 AC138089.1-201ENST00000450847 967 ntTSL 2 BASIC7.84□□□□□ -1.15
SLC1A1P43005 AC002463.1-201ENST00000453459 1188 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SLC1A1P43005 CHIAP1-201ENST00000456220 995 ntBASIC7.84□□□□□ -1.15
SLC1A1P43005 AF186996.3-201ENST00000509527 964 ntBASIC7.84□□□□□ -1.15
SLC1A1P43005 DCSTAMP-203ENST00000517991 949 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SLC1A1P43005 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC7.84□□□□□ -1.15
SLC1A1P43005 OR7E87P-201ENST00000532397 929 ntBASIC7.84□□□□□ -1.15
SLC1A1P43005 AC129492.5-201ENST00000603489 315 ntBASIC7.84□□□□□ -1.15
SLC1A1P43005 AL109918.2-201ENST00000605188 279 ntBASIC7.84□□□□□ -1.15
SLC1A1P43005 U47924.1-201ENST00000606539 434 ntBASIC7.84□□□□□ -1.15
SLC1A1P43005 RN7SL680P-201ENST00000620379 299 ntBASIC7.84□□□□□ -1.15
SLC1A1P43005 SNORA43.5-201ENST00000631270 138 ntBASIC7.84□□□□□ -1.15
SLC1A1P43005 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
SLC1A1P43005 ANGPT2-203ENST00000523120 2997 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SLC1A1P43005 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
SLC1A1P43005 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
SLC1A1P43005 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SLC1A1P43005 CSNK2A3-201ENST00000528848 1416 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
SLC1A1P43005 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC7.84□□□□□ -1.15
SLC1A1P43005 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC7.84□□□□□ -1.15
SLC1A1P43005 TFG-204ENST00000476228 1783 ntAPPRIS ALT1 TSL 1 (best) BASIC7.84□□□□□ -1.15
SLC1A1P43005 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
SLC1A1P43005 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SLC1A1P43005 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SLC1A1P43005 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
SLC1A1P43005 GABRE-201ENST00000370328 3152 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SLC1A1P43005 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SLC1A1P43005 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
SLC1A1P43005 FAM49A-201ENST00000381323 4670 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SLC1A1P43005 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC7.83□□□□□ -1.16
SLC1A1P43005 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
SLC1A1P43005 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SLC1A1P43005 UBE2V1-202ENST00000371657 1973 ntTSL 4 BASIC7.83□□□□□ -1.16
SLC1A1P43005 RNA5SP79-201ENST00000365193 109 ntBASIC7.83□□□□□ -1.16
SLC1A1P43005 COQ3-202ENST00000369240 646 ntTSL 5 BASIC7.83□□□□□ -1.16
SLC1A1P43005 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
SLC1A1P43005 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC7.83□□□□□ -1.16
SLC1A1P43005 AC133644.1-201ENST00000398171 937 ntBASIC7.83□□□□□ -1.16
SLC1A1P43005 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
SLC1A1P43005 HSPE1-202ENST00000409468 570 ntTSL 2 BASIC7.83□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms