Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 ATP5G1P5-201ENST00000429024 411 ntBASIC7.15□□□□□ -1.26
SCN2BO60939 LINC00460-201ENST00000435024 631 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
SCN2BO60939 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC7.15□□□□□ -1.26
SCN2BO60939 AC022816.1-201ENST00000436469 804 ntTSL 5 BASIC7.15□□□□□ -1.26
SCN2BO60939 AL590004.3-201ENST00000450255 443 ntTSL 5 BASIC7.15□□□□□ -1.26
SCN2BO60939 AL353615.1-201ENST00000450850 390 ntTSL 3 BASIC7.15□□□□□ -1.26
SCN2BO60939 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC7.15□□□□□ -1.26
SCN2BO60939 RN7SL368P-201ENST00000473384 277 ntBASIC7.15□□□□□ -1.26
SCN2BO60939 AC146944.2-201ENST00000504546 1073 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
SCN2BO60939 SSX8-201ENST00000506270 579 ntBASIC7.15□□□□□ -1.26
SCN2BO60939 HEXB-205ENST00000509579 806 ntTSL 2 BASIC7.15□□□□□ -1.26
SCN2BO60939 AC139495.1-201ENST00000510264 1073 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
SCN2BO60939 CKMT2-AS1-206ENST00000511495 585 ntTSL 4 BASIC7.15□□□□□ -1.26
SCN2BO60939 AC090568.2-203ENST00000521433 579 ntTSL 4 BASIC7.15□□□□□ -1.26
SCN2BO60939 PTTG3P-201ENST00000521862 606 ntBASIC7.15□□□□□ -1.26
SCN2BO60939 FXYD5-207ENST00000541435 898 ntAPPRIS P2 TSL 2 BASIC7.15□□□□□ -1.26
SCN2BO60939 LAMTOR5-AS1-205ENST00000587691 441 ntTSL 3 BASIC7.15□□□□□ -1.26
SCN2BO60939 FARSA-AS1-201ENST00000592636 241 ntTSL 5 BASIC7.15□□□□□ -1.26
SCN2BO60939 AC006115.1-201ENST00000599726 517 ntTSL 5 BASIC7.15□□□□□ -1.26
SCN2BO60939 AL391807.1-201ENST00000603261 712 ntTSL 5 BASIC7.15□□□□□ -1.26
SCN2BO60939 PROX1-AS1-221ENST00000615085 673 ntTSL 5 BASIC7.15□□□□□ -1.26
SCN2BO60939 MIR8089-201ENST00000620165 82 ntBASIC7.15□□□□□ -1.26
SCN2BO60939 Metazoa_SRP.42-201ENST00000621081 348 ntBASIC7.15□□□□□ -1.26
SCN2BO60939 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC7.15□□□□□ -1.26
SCN2BO60939 EEF1A1P2-201ENST00000553854 1447 ntBASIC7.15□□□□□ -1.27
SCN2BO60939 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC7.15□□□□□ -1.27
SCN2BO60939 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
SCN2BO60939 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
SCN2BO60939 ARHGAP42P4-201ENST00000549782 2934 ntBASIC7.15□□□□□ -1.27
SCN2BO60939 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
SCN2BO60939 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
SCN2BO60939 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC7.15□□□□□ -1.27
SCN2BO60939 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
SCN2BO60939 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.27
SCN2BO60939 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC7.15□□□□□ -1.27
SCN2BO60939 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC7.15□□□□□ -1.27
SCN2BO60939 ESRRG-222ENST00000493748 2074 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
SCN2BO60939 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
SCN2BO60939 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
SCN2BO60939 CWC27-204ENST00000508024 2103 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
SCN2BO60939 UPP2-201ENST00000005756 2224 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
SCN2BO60939 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC7.15□□□□□ -1.27
SCN2BO60939 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SCN2BO60939 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC7.14□□□□□ -1.27
SCN2BO60939 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
SCN2BO60939 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
SCN2BO60939 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SCN2BO60939 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SCN2BO60939 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SCN2BO60939 CWC15-201ENST00000279839 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SCN2BO60939 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
SCN2BO60939 IMPG1-203ENST00000369963 868 ntTSL 5 BASIC7.14□□□□□ -1.27
SCN2BO60939 BEND6-201ENST00000370745 579 ntTSL 5 BASIC7.14□□□□□ -1.27
SCN2BO60939 NXT2-204ENST00000372107 937 ntTSL 3 BASIC7.14□□□□□ -1.27
SCN2BO60939 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SCN2BO60939 FAM49A-201ENST00000381323 4670 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SCN2BO60939 GZMB-203ENST00000382542 666 ntTSL 2 BASIC7.14□□□□□ -1.27
SCN2BO60939 MIR575-201ENST00000385013 94 ntBASIC7.14□□□□□ -1.27
SCN2BO60939 AC011753.4-201ENST00000417974 311 ntBASIC7.14□□□□□ -1.27
SCN2BO60939 RPL19P21-201ENST00000424919 591 ntBASIC7.14□□□□□ -1.27
SCN2BO60939 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC7.14□□□□□ -1.27
SCN2BO60939 KIF3AP1-201ENST00000454055 611 ntBASIC7.14□□□□□ -1.27
SCN2BO60939 AL355312.2-201ENST00000455607 1541 ntTSL 5 BASIC7.14□□□□□ -1.27
SCN2BO60939 AL590648.1-201ENST00000456479 460 ntBASIC7.14□□□□□ -1.27
SCN2BO60939 RN7SL19P-201ENST00000462522 306 ntBASIC7.14□□□□□ -1.27
SCN2BO60939 AC018816.1-206ENST00000474544 455 ntTSL 3 BASIC7.14□□□□□ -1.27
SCN2BO60939 RN7SL239P-201ENST00000490061 300 ntBASIC7.14□□□□□ -1.27
SCN2BO60939 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SCN2BO60939 BIN2P2-201ENST00000503900 1303 ntBASIC7.14□□□□□ -1.27
SCN2BO60939 ZNF840P-201ENST00000504759 1996 ntBASIC7.14□□□□□ -1.27
SCN2BO60939 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC7.14□□□□□ -1.27
SCN2BO60939 MS4A6A-208ENST00000528851 1806 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SCN2BO60939 AC087280.1-201ENST00000530632 1003 ntBASIC7.14□□□□□ -1.27
SCN2BO60939 AC144548.1-201ENST00000549577 324 ntBASIC7.14□□□□□ -1.27
SCN2BO60939 AC023794.4-201ENST00000551732 754 ntTSL 5 BASIC7.14□□□□□ -1.27
SCN2BO60939 AL358332.1-201ENST00000555649 813 ntTSL 5 BASIC7.14□□□□□ -1.27
SCN2BO60939 AC026464.1-202ENST00000564737 722 ntAPPRIS P5 TSL 5 BASIC7.14□□□□□ -1.27
SCN2BO60939 AC074051.4-201ENST00000564888 892 ntBASIC7.14□□□□□ -1.27
SCN2BO60939 SAXO2-204ENST00000565432 811 ntAPPRIS ALT2 TSL 4 BASIC7.14□□□□□ -1.27
SCN2BO60939 AC018521.6-201ENST00000584276 335 ntTSL 5 BASIC7.14□□□□□ -1.27
SCN2BO60939 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC7.14□□□□□ -1.27
SCN2BO60939 AC114810.1-201ENST00000607415 473 ntBASIC7.14□□□□□ -1.27
SCN2BO60939 AL731533.2-201ENST00000607898 578 ntBASIC7.14□□□□□ -1.27
SCN2BO60939 MIR7162-201ENST00000611134 69 ntBASIC7.14□□□□□ -1.27
SCN2BO60939 IGKV1OR1-1-201ENST00000613775 347 ntBASIC7.14□□□□□ -1.27
SCN2BO60939 AL157392.3-206ENST00000614899 822 ntTSL 5 BASIC7.14□□□□□ -1.27
SCN2BO60939 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SCN2BO60939 OR8D2-201ENST00000624618 1051 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
SCN2BO60939 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC7.14□□□□□ -1.27
SCN2BO60939 AC068205.4-201ENST00000637880 804 ntBASIC7.14□□□□□ -1.27
SCN2BO60939 HCCAT5-202ENST00000642127 1029 ntBASIC7.14□□□□□ -1.27
SCN2BO60939 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC7.14□□□□□ -1.27
SCN2BO60939 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SCN2BO60939 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
SCN2BO60939 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
SCN2BO60939 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SCN2BO60939 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC7.14□□□□□ -1.27
SCN2BO60939 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC7.14□□□□□ -1.27
SCN2BO60939 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SCN2BO60939 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms