Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 MIR5192-201ENST00000579892 92 ntBASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 AC011458.1-201ENST00000604034 617 ntBASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 DIS3L2-202ENST00000325385 3501 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 ZNF680-201ENST00000309683 3022 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 LUARIS-201ENST00000436105 2916 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 TLR3-202ENST00000504367 2310 ntTSL 2 BASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 FAM13A-205ENST00000503556 3386 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 AC092999.1-201ENST00000624004 1924 ntBASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 MAGEB18-201ENST00000325250 1811 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 AC110998.1-201ENST00000519029 2053 ntBASIC8.02□□□□□ -1.12
CDK5RAP1Q96SZ6 CACYBP-209ENST00000613570 2835 ntTSL 2 BASIC8.02□□□□□ -1.12
CDK5RAP1Q96SZ6 RIPOR2-205ENST00000510784 3381 ntTSL 2 BASIC8.02□□□□□ -1.12
CDK5RAP1Q96SZ6 KIAA1324L-203ENST00000416314 3179 ntAPPRIS P3 TSL 2 BASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 ITPK1-AS1-201ENST00000553639 4701 ntBASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 UBR1-202ENST00000546274 3332 ntTSL 2 BASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 AL109811.1-201ENST00000452378 2682 ntTSL 2 BASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 NASP-203ENST00000372052 1458 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 TCF4-203ENST00000398339 2551 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 LMLN-202ENST00000332636 1812 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 CTH-202ENST00000370938 1805 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 AC023055.1-201ENST00000546837 1807 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 BAAT-201ENST00000259407 3377 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 TRBV6-6-201ENST00000390371 388 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 NHP2P2-201ENST00000396362 460 ntBASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 MORN2-202ENST00000409077 465 ntTSL 5 BASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 RN7SKP207-201ENST00000411204 303 ntBASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 BCRP8-201ENST00000412037 255 ntBASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 SNRK-AS1-201ENST00000422681 750 ntTSL 3 BASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 MTCYBP32-201ENST00000427945 1084 ntBASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 AC097468.2-201ENST00000429343 553 ntTSL 4 BASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 BX322234.2-202ENST00000435612 479 ntTSL 3 BASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 AL049651.1-201ENST00000440798 719 ntTSL 5 BASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 AC093157.1-202ENST00000446527 1045 ntTSL 3 BASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 MRPS21P1-201ENST00000453850 223 ntBASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 RN7SL861P-201ENST00000473793 285 ntBASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 RN7SL335P-201ENST00000482790 304 ntBASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 LINC01094-206ENST00000514130 594 ntTSL 4 BASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 LDHBP3-201ENST00000514909 822 ntBASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 OR7E87P-201ENST00000532397 929 ntBASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 TGFB3-AS1-201ENST00000553732 580 ntTSL 4 BASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 CMC2-213ENST00000565914 528 ntAPPRIS P1 TSL 3 BASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 AC087292.1-201ENST00000573371 512 ntTSL 5 BASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 ZNF174-205ENST00000575752 1068 ntTSL 5 BASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 AL161725.1-210ENST00000590240 1224 ntTSL 5 BASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 AC007262.1-201ENST00000604099 321 ntBASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 5S_rRNA.20-201ENST00000612104 118 ntBASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 AC080188.3-201ENST00000624842 748 ntBASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 LINC01358-208ENST00000634569 1030 ntTSL 5 BASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 CD40LG-201ENST00000370628 1720 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 GLYATL2-201ENST00000287275 1640 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 HKR1-203ENST00000541583 2758 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 AC020904.2-202ENST00000614660 1401 ntBASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 ADGRF2-204ENST00000507065 3043 ntTSL 5 BASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 USP37-204ENST00000418019 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 AKAP7-202ENST00000342266 2461 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CDK5RAP1Q96SZ6 AL008638.3-201ENST00000623027 5182 ntBASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 PHF2P2-202ENST00000444553 2865 ntBASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 AC016747.1-201ENST00000420918 2532 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 AL034397.3-202ENST00000621933 1815 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 IL31RA-205ENST00000396836 2426 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 NMD3-201ENST00000351193 3049 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 VN2R1P-201ENST00000449668 1743 ntBASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 FHL1-204ENST00000370683 2565 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 ATP5A1P10-201ENST00000622403 1603 ntBASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 KLHL32-202ENST00000369261 3698 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 ORM1-201ENST00000259396 802 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 BSPH1-201ENST00000344839 654 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CDK5RAP1Q96SZ6 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms