Protein–RNA interactions for Protein: Q53EP0

FNDC3B, Fibronectin type III domain-containing protein 3B, humanhuman

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3BQ53EP0 PIGN-225ENST00000638435 4382 ntTSL 5 BASIC8□□□□□ -1.13
FNDC3BQ53EP0 PDZK1-202ENST00000417171 2230 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
FNDC3BQ53EP0 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC8□□□□□ -1.13
FNDC3BQ53EP0 LDB3-201ENST00000263066 3873 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
FNDC3BQ53EP0 GIMAP8-201ENST00000307271 4184 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
FNDC3BQ53EP0 RNF219-201ENST00000282003 3529 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
FNDC3BQ53EP0 C1orf158-203ENST00000614859 3549 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
FNDC3BQ53EP0 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
FNDC3BQ53EP0 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
FNDC3BQ53EP0 AL136520.1-201ENST00000600311 1322 ntBASIC8□□□□□ -1.13
FNDC3BQ53EP0 NRG3-206ENST00000545131 2713 ntTSL 5 BASIC8□□□□□ -1.13
FNDC3BQ53EP0 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC8□□□□□ -1.13
FNDC3BQ53EP0 PRDM10-205ENST00000526082 3308 ntTSL 1 (best) BASIC8□□□□□ -1.13
FNDC3BQ53EP0 AC016251.1-201ENST00000624299 4198 ntBASIC8□□□□□ -1.13
FNDC3BQ53EP0 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC8□□□□□ -1.13
FNDC3BQ53EP0 ZEB2-205ENST00000419938 1755 ntTSL 2 BASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 AL353052.2-201ENST00000441459 2241 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 PPARGC1A-206ENST00000507380 2385 ntTSL 2 BASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 EEF1A1P3-201ENST00000417549 1385 ntBASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 NHLRC3-201ENST00000379599 3275 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 MYB-235ENST00000533624 1818 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 MYB-238ENST00000534044 1812 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 MAPK10-228ENST00000512689 2583 ntTSL 5 BASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 LAX1-203ENST00000442561 3023 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 TNS4-201ENST00000254051 4067 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 POT1-201ENST00000357628 4080 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 ZNF10-201ENST00000248211 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 RIT2-201ENST00000326695 1092 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 PPCS-204ENST00000372562 966 ntTSL 2 BASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 FKBP1A-203ENST00000381724 976 ntTSL 2 BASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 MIR301B-201ENST00000390813 78 ntBASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 AC092952.1-201ENST00000397646 1209 ntBASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 AC022400.3-201ENST00000399449 3810 ntTSL 5 BASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 OR7E91P-201ENST00000400027 866 ntBASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 AC226101.1-201ENST00000401483 387 ntBASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 SLC2A11-205ENST00000403208 564 ntTSL 4 BASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 AL109918.1-202ENST00000406724 436 ntBASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 LSM5-203ENST00000409782 649 ntTSL 5 BASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 AL358942.1-201ENST00000418595 1178 ntBASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 AL157402.1-201ENST00000429469 363 ntTSL 3 BASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 LINC00460-201ENST00000435024 631 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 CYP2C56P-201ENST00000440076 291 ntBASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 KIF3AP1-201ENST00000454055 611 ntBASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 AL590490.1-201ENST00000455599 316 ntTSL 5 BASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 RN7SL414P-201ENST00000469545 294 ntBASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 TLR1-202ENST00000502213 2779 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 LDB2-203ENST00000502640 2626 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 AC016550.1-201ENST00000505348 785 ntBASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 AC026700.1-201ENST00000512074 544 ntBASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 EIF3KP1-201ENST00000513279 656 ntBASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 CAPSL-204ENST00000514524 656 ntTSL 2 BASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 IGHV7-40-201ENST00000520963 296 ntBASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 OR10D4P-201ENST00000525892 951 ntBASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 AC006205.2-201ENST00000538943 373 ntTSL 2 BASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 KIF21A-204ENST00000544797 5040 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 LINC02385-201ENST00000547554 428 ntTSL 5 BASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 HNRNPC-226ENST00000556628 1156 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 AC090286.3-201ENST00000573133 187 ntBASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 RPAP2P1-201ENST00000603626 1168 ntBASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 IZUMO3-203ENST00000604921 743 ntAPPRIS P2 TSL 5 BASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 AC087623.4-201ENST00000606593 695 ntBASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 AC143336.1-201ENST00000614164 836 ntBASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 FAM13C-215ENST00000614220 3388 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 AL354733.2-202ENST00000615485 742 ntTSL 5 BASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 AC024475.4-201ENST00000635144 1206 ntTSL 5 BASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 AC006453.5-201ENST00000636451 619 ntBASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 AC119674.1-220ENST00000641502 1048 ntBASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 ZNF317-201ENST00000247956 4073 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 AL365475.1-201ENST00000565135 1949 ntBASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 PIWIL4-201ENST00000299001 3199 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 MRPL22-206ENST00000522038 3162 ntAPPRIS ALT1 TSL 5 BASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 CHRDL1-203ENST00000394797 2413 ntAPPRIS P3 TSL 5 BASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 AC099753.1-201ENST00000634947 2118 ntTSL 5 BASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 AC020895.2-201ENST00000624996 1839 ntBASIC7.99□□□□□ -1.13
FNDC3BQ53EP0 RETREG1-202ENST00000399793 3145 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
FNDC3BQ53EP0 SLC16A1P1-201ENST00000486743 1510 ntBASIC7.98□□□□□ -1.13
FNDC3BQ53EP0 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
FNDC3BQ53EP0 FCGR2A-202ENST00000367972 1399 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
FNDC3BQ53EP0 MAPK10-329ENST00000641555 2656 ntBASIC7.98□□□□□ -1.13
FNDC3BQ53EP0 AF121897.1-201ENST00000411867 3980 ntBASIC7.98□□□□□ -1.13
FNDC3BQ53EP0 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC7.98□□□□□ -1.13
FNDC3BQ53EP0 ACTR6-209ENST00000551617 1715 ntTSL 5 BASIC7.98□□□□□ -1.13
FNDC3BQ53EP0 APEX2-201ENST00000374987 3245 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
FNDC3BQ53EP0 EXOC7P1-201ENST00000509881 2059 ntBASIC7.98□□□□□ -1.13
FNDC3BQ53EP0 XRCC6P4-201ENST00000518193 2067 ntBASIC7.98□□□□□ -1.13
FNDC3BQ53EP0 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
FNDC3BQ53EP0 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
FNDC3BQ53EP0 HEATR6-201ENST00000184956 3932 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms