Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
HMG20BQ9P0W2 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
HMG20BQ9P0W2 CSDE1-214ENST00000530886 3459 ntTSL 5 BASIC9.22□□□□□ -0.93
HMG20BQ9P0W2 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
HMG20BQ9P0W2 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC9.22□□□□□ -0.93
HMG20BQ9P0W2 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC9.22□□□□□ -0.93
HMG20BQ9P0W2 AC051619.3-201ENST00000560646 2426 ntBASIC9.22□□□□□ -0.93
HMG20BQ9P0W2 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
HMG20BQ9P0W2 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC9.22□□□□□ -0.93
HMG20BQ9P0W2 CEP41-203ENST00000343969 1087 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
HMG20BQ9P0W2 RNU1-122P-201ENST00000365538 156 ntBASIC9.22□□□□□ -0.93
HMG20BQ9P0W2 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
HMG20BQ9P0W2 TMEM126B-202ENST00000393375 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
HMG20BQ9P0W2 RPL5P8-201ENST00000396820 815 ntBASIC9.22□□□□□ -0.93
HMG20BQ9P0W2 OR7E36P-201ENST00000419933 954 ntBASIC9.22□□□□□ -0.93
HMG20BQ9P0W2 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC9.22□□□□□ -0.93
HMG20BQ9P0W2 AC245047.5-201ENST00000437312 556 ntBASIC9.22□□□□□ -0.93
HMG20BQ9P0W2 SYNPR-208ENST00000472899 527 ntTSL 4 BASIC9.22□□□□□ -0.93
HMG20BQ9P0W2 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC9.22□□□□□ -0.93
HMG20BQ9P0W2 MIR4437-201ENST00000581331 60 ntBASIC9.22□□□□□ -0.93
HMG20BQ9P0W2 AL513548.2-201ENST00000602994 1207 ntBASIC9.22□□□□□ -0.93
HMG20BQ9P0W2 AC108451.2-201ENST00000603875 538 ntBASIC9.22□□□□□ -0.93
HMG20BQ9P0W2 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC9.22□□□□□ -0.93
HMG20BQ9P0W2 AC006335.3-201ENST00000613408 292 ntBASIC9.22□□□□□ -0.93
HMG20BQ9P0W2 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC9.22□□□□□ -0.93
HMG20BQ9P0W2 TPD52-202ENST00000379097 2563 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
HMG20BQ9P0W2 AL512662.1-201ENST00000624850 2251 ntBASIC9.22□□□□□ -0.93
HMG20BQ9P0W2 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
HMG20BQ9P0W2 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
HMG20BQ9P0W2 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC9.22□□□□□ -0.93
HMG20BQ9P0W2 AL357556.1-201ENST00000421884 1388 ntBASIC9.22□□□□□ -0.93
HMG20BQ9P0W2 RBM5-AS1-201ENST00000630404 1386 ntBASIC9.22□□□□□ -0.93
HMG20BQ9P0W2 FBXO36-202ENST00000373652 3120 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
HMG20BQ9P0W2 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC9.22□□□□□ -0.93
HMG20BQ9P0W2 C4orf46-202ENST00000508457 3358 ntTSL 5 BASIC9.21□□□□□ -0.93
HMG20BQ9P0W2 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
HMG20BQ9P0W2 CDY2B-201ENST00000382867 1961 ntAPPRIS ALT1 BASIC9.21□□□□□ -0.93
HMG20BQ9P0W2 VSIG1-202ENST00000415430 3236 ntAPPRIS ALT2 TSL 2 BASIC9.21□□□□□ -0.93
HMG20BQ9P0W2 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
HMG20BQ9P0W2 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC9.21□□□□□ -0.93
HMG20BQ9P0W2 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
HMG20BQ9P0W2 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
HMG20BQ9P0W2 MXI1-204ENST00000369612 879 ntTSL 3 BASIC9.21□□□□□ -0.94
HMG20BQ9P0W2 SSX6-201ENST00000376932 562 ntBASIC9.21□□□□□ -0.94
HMG20BQ9P0W2 AL645634.1-201ENST00000418426 462 ntTSL 3 BASIC9.21□□□□□ -0.94
HMG20BQ9P0W2 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC9.21□□□□□ -0.94
HMG20BQ9P0W2 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC9.21□□□□□ -0.94
HMG20BQ9P0W2 LINC01053-201ENST00000457628 771 ntTSL 2 BASIC9.21□□□□□ -0.94
HMG20BQ9P0W2 RN7SL145P-201ENST00000469955 296 ntBASIC9.21□□□□□ -0.94
HMG20BQ9P0W2 CEACAMP3-202ENST00000483806 638 ntBASIC9.21□□□□□ -0.94
HMG20BQ9P0W2 AC097263.1-201ENST00000496795 606 ntBASIC9.21□□□□□ -0.94
HMG20BQ9P0W2 RASGRF2-AS1-201ENST00000505107 665 ntTSL 3 BASIC9.21□□□□□ -0.94
HMG20BQ9P0W2 AP004833.1-201ENST00000507987 1238 ntBASIC9.21□□□□□ -0.94
HMG20BQ9P0W2 AC090539.2-201ENST00000523425 671 ntBASIC9.21□□□□□ -0.94
HMG20BQ9P0W2 AC084880.4-201ENST00000538405 577 ntTSL 2 BASIC9.21□□□□□ -0.94
HMG20BQ9P0W2 AL358334.3-201ENST00000557343 535 ntTSL 3 BASIC9.21□□□□□ -0.94
HMG20BQ9P0W2 AC104938.1-203ENST00000561834 546 ntTSL 3 BASIC9.21□□□□□ -0.94
HMG20BQ9P0W2 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC9.21□□□□□ -0.94
HMG20BQ9P0W2 LINC02180-201ENST00000566439 1010 ntTSL 3 BASIC9.21□□□□□ -0.94
HMG20BQ9P0W2 AL512413.1-201ENST00000606489 382 ntBASIC9.21□□□□□ -0.94
HMG20BQ9P0W2 U47924.1-201ENST00000606539 434 ntBASIC9.21□□□□□ -0.94
HMG20BQ9P0W2 FAM27E3-202ENST00000614611 340 ntBASIC9.21□□□□□ -0.94
HMG20BQ9P0W2 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC9.21□□□□□ -0.94
HMG20BQ9P0W2 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
HMG20BQ9P0W2 LINC01358-207ENST00000634502 2575 ntTSL 5 BASIC9.21□□□□□ -0.94
HMG20BQ9P0W2 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
HMG20BQ9P0W2 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC9.21□□□□□ -0.94
HMG20BQ9P0W2 LINC00208-201ENST00000304233 2150 ntTSL 2 BASIC9.21□□□□□ -0.94
HMG20BQ9P0W2 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
HMG20BQ9P0W2 ZFP2-205ENST00000523286 2154 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
HMG20BQ9P0W2 AL606490.2-201ENST00000457562 1330 ntBASIC9.21□□□□□ -0.94
HMG20BQ9P0W2 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC9.21□□□□□ -0.94
HMG20BQ9P0W2 JAZF1-201ENST00000283928 3125 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
HMG20BQ9P0W2 CSF2RA-206ENST00000381529 1816 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
HMG20BQ9P0W2 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
HMG20BQ9P0W2 DNAAF4-203ENST00000448430 1445 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
HMG20BQ9P0W2 TRPS1-208ENST00000519076 3329 ntTSL 5 BASIC9.21□□□□□ -0.94
HMG20BQ9P0W2 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
HMG20BQ9P0W2 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC9.21□□□□□ -0.94
HMG20BQ9P0W2 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
HMG20BQ9P0W2 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
HMG20BQ9P0W2 FLJ21408-201ENST00000499939 2594 ntTSL 2 BASIC9.2□□□□□ -0.94
HMG20BQ9P0W2 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
HMG20BQ9P0W2 OR4F15-201ENST00000332238 2119 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
HMG20BQ9P0W2 PAXIP1-AS2-201ENST00000397551 1692 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
HMG20BQ9P0W2 THAP12P7-201ENST00000520248 2290 ntBASIC9.2□□□□□ -0.94
HMG20BQ9P0W2 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC9.2□□□□□ -0.94
HMG20BQ9P0W2 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
HMG20BQ9P0W2 BCL2L14-204ENST00000396367 1886 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
HMG20BQ9P0W2 AC009690.2-201ENST00000570175 3148 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
HMG20BQ9P0W2 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
HMG20BQ9P0W2 GIP-201ENST00000357424 716 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
HMG20BQ9P0W2 RN7SKP63-201ENST00000363187 301 ntBASIC9.2□□□□□ -0.94
HMG20BQ9P0W2 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
HMG20BQ9P0W2 SNORD15A-201ENST00000384214 148 ntBASIC9.2□□□□□ -0.94
HMG20BQ9P0W2 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
HMG20BQ9P0W2 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC9.2□□□□□ -0.94
HMG20BQ9P0W2 GRXCR1-201ENST00000399770 991 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
HMG20BQ9P0W2 SSR1P1-201ENST00000407630 814 ntBASIC9.2□□□□□ -0.94
HMG20BQ9P0W2 PRELID1P2-201ENST00000407805 396 ntBASIC9.2□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms