Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
COL15A1P39059 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC9.54□□□□□ -0.88
COL15A1P39059 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
COL15A1P39059 MTIF2-203ENST00000394600 2221 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
COL15A1P39059 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC9.54□□□□□ -0.88
COL15A1P39059 MPEG1-201ENST00000361050 4442 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
COL15A1P39059 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
COL15A1P39059 IL18RAP-202ENST00000409369 1890 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
COL15A1P39059 AC016831.3-201ENST00000446451 1723 ntBASIC9.53□□□□□ -0.88
COL15A1P39059 CSMD1-218ENST00000635120 11737 ntAPPRIS P2 TSL 5 BASIC9.53□□□□□ -0.88
COL15A1P39059 KIAA1328-207ENST00000591619 5881 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
COL15A1P39059 MBD3L1-201ENST00000305625 748 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
COL15A1P39059 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
COL15A1P39059 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC9.53□□□□□ -0.88
COL15A1P39059 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
COL15A1P39059 NDUFV2-202ENST00000400033 942 ntTSL 3 BASIC9.53□□□□□ -0.88
COL15A1P39059 AC009413.1-201ENST00000414823 399 ntBASIC9.53□□□□□ -0.88
COL15A1P39059 AC004986.1-201ENST00000414855 607 ntBASIC9.53□□□□□ -0.88
COL15A1P39059 AL589794.1-201ENST00000424971 390 ntBASIC9.53□□□□□ -0.88
COL15A1P39059 SNX19-202ENST00000426933 888 ntTSL 2 BASIC9.53□□□□□ -0.88
COL15A1P39059 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC9.53□□□□□ -0.88
COL15A1P39059 AL645568.1-202ENST00000437190 1016 ntTSL 5 BASIC9.53□□□□□ -0.88
COL15A1P39059 AC013787.1-201ENST00000460165 307 ntBASIC9.53□□□□□ -0.88
COL15A1P39059 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC9.53□□□□□ -0.88
COL15A1P39059 OR6M3P-201ENST00000531567 700 ntBASIC9.53□□□□□ -0.88
COL15A1P39059 BMS1P15-201ENST00000554269 1141 ntBASIC9.53□□□□□ -0.88
COL15A1P39059 BMS1P16-201ENST00000556075 1147 ntBASIC9.53□□□□□ -0.88
COL15A1P39059 AL358334.3-201ENST00000557343 535 ntTSL 3 BASIC9.53□□□□□ -0.88
COL15A1P39059 AC122710.3-201ENST00000606566 541 ntBASIC9.53□□□□□ -0.88
COL15A1P39059 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC9.53□□□□□ -0.88
COL15A1P39059 AL353898.3-201ENST00000624679 1755 ntBASIC9.53□□□□□ -0.88
COL15A1P39059 YAP1-203ENST00000524575 1638 ntTSL 2 BASIC9.53□□□□□ -0.88
COL15A1P39059 ADAM22-205ENST00000398209 9144 ntAPPRIS P4 TSL 1 (best) BASIC9.53□□□□□ -0.88
COL15A1P39059 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC9.53□□□□□ -0.88
COL15A1P39059 TATDN2P1-201ENST00000443767 2331 ntBASIC9.53□□□□□ -0.88
COL15A1P39059 ERVFRD-1-202ENST00000542862 3184 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
COL15A1P39059 ZNF611-204ENST00000543227 4517 ntAPPRIS P1 TSL 4 BASIC9.53□□□□□ -0.88
COL15A1P39059 AIM2-202ENST00000368130 1529 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
COL15A1P39059 ZHX3-214ENST00000559234 6296 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
COL15A1P39059 ZNF844-201ENST00000439326 6620 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
COL15A1P39059 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
COL15A1P39059 SCARB2-211ENST00000638603 4284 ntTSL 5 BASIC9.53□□□□□ -0.88
COL15A1P39059 GIGYF2-201ENST00000373563 5847 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
COL15A1P39059 RAD54L2-201ENST00000409535 9776 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
COL15A1P39059 SLFN11-202ENST00000394566 5030 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
COL15A1P39059 FCRL5-201ENST00000361835 5390 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
COL15A1P39059 EGFLAM-AS4-201ENST00000512496 1579 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
COL15A1P39059 PDLIM5-221ENST00000542407 2979 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
COL15A1P39059 MSANTD3-206ENST00000613183 1755 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.88
COL15A1P39059 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
COL15A1P39059 TIAL1-205ENST00000436547 1401 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
COL15A1P39059 CDY2B-201ENST00000382867 1961 ntAPPRIS ALT1 BASIC9.52□□□□□ -0.88
COL15A1P39059 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC9.52□□□□□ -0.88
COL15A1P39059 LINC01692-201ENST00000441009 2719 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
COL15A1P39059 ORM1-201ENST00000259396 802 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
COL15A1P39059 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.88
COL15A1P39059 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC9.52□□□□□ -0.88
COL15A1P39059 FAM183DP-201ENST00000421987 399 ntBASIC9.52□□□□□ -0.88
COL15A1P39059 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC9.52□□□□□ -0.88
COL15A1P39059 CELF2-AS2-202ENST00000432370 1227 ntTSL 5 BASIC9.52□□□□□ -0.88
COL15A1P39059 LIN28AP2-201ENST00000445283 458 ntBASIC9.52□□□□□ -0.88
COL15A1P39059 SUMO2P17-201ENST00000504438 285 ntBASIC9.52□□□□□ -0.88
COL15A1P39059 RPL32P3-203ENST00000506593 498 ntTSL 5 BASIC9.52□□□□□ -0.88
COL15A1P39059 AC008496.1-201ENST00000509131 295 ntBASIC9.52□□□□□ -0.88
COL15A1P39059 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC9.52□□□□□ -0.88
COL15A1P39059 AC091563.1-201ENST00000520544 490 ntTSL 3 BASIC9.52□□□□□ -0.88
COL15A1P39059 MYL6-211ENST00000548580 528 ntTSL 2 BASIC9.52□□□□□ -0.88
COL15A1P39059 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC9.52□□□□□ -0.88
COL15A1P39059 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC9.52□□□□□ -0.88
COL15A1P39059 uc_338.21-201ENST00000622458 147 ntBASIC9.52□□□□□ -0.88
COL15A1P39059 LINC01778-208ENST00000635288 1095 ntTSL 5 BASIC9.52□□□□□ -0.88
COL15A1P39059 AC009318.1-201ENST00000553105 2380 ntTSL 2 BASIC9.52□□□□□ -0.88
COL15A1P39059 CACNB4-250ENST00000637418 2015 ntTSL 5 BASIC9.52□□□□□ -0.89
COL15A1P39059 DGKK-201ENST00000611977 7407 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
COL15A1P39059 FLG-AS1-202ENST00000392688 2995 ntTSL 2 BASIC9.52□□□□□ -0.89
COL15A1P39059 VLDLR-AS1-201ENST00000416826 3167 ntTSL 2 BASIC9.52□□□□□ -0.89
COL15A1P39059 ARHGAP19-202ENST00000358531 5463 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
COL15A1P39059 GSTM4-203ENST00000369833 3990 ntTSL 5 BASIC9.52□□□□□ -0.89
COL15A1P39059 KLHL8-208ENST00000512111 3245 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
COL15A1P39059 MATR3-232ENST00000502929 4373 ntTSL 2 BASIC9.52□□□□□ -0.89
COL15A1P39059 PSMC2-203ENST00000435765 3054 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
COL15A1P39059 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
COL15A1P39059 KIAA1217-201ENST00000307544 3281 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
COL15A1P39059 ZBTB40-204ENST00000404138 8992 ntAPPRIS P3 TSL 5 BASIC9.52□□□□□ -0.89
COL15A1P39059 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
COL15A1P39059 AC006141.1-201ENST00000581917 2170 ntBASIC9.52□□□□□ -0.89
COL15A1P39059 GPR156-201ENST00000315843 4193 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
COL15A1P39059 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
COL15A1P39059 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC9.52□□□□□ -0.89
COL15A1P39059 SOSTDC1-202ENST00000396652 2411 ntTSL 2 BASIC9.52□□□□□ -0.89
COL15A1P39059 GABRA1-202ENST00000393943 4686 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
COL15A1P39059 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
COL15A1P39059 TMPPE-202ENST00000416695 3451 ntAPPRIS ALT2 TSL 2 BASIC9.52□□□□□ -0.89
COL15A1P39059 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
COL15A1P39059 LINC01234-202ENST00000547963 2088 ntTSL 2 BASIC9.52□□□□□ -0.89
COL15A1P39059 FAM122C-211ENST00000623326 2064 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
COL15A1P39059 AKAP3-201ENST00000228850 3339 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
COL15A1P39059 EIF4G3-201ENST00000264211 5802 ntAPPRIS P3 TSL 5 BASIC9.52□□□□□ -0.89
COL15A1P39059 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC9.51□□□□□ -0.89
COL15A1P39059 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC9.51□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms