Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 BCLAF1-223ENST00000628517 2512 ntTSL 5 BASIC7.32□□□□□ -1.24
SKP1P63208 RRN3-203ENST00000429751 2198 ntTSL 2 BASIC7.32□□□□□ -1.24
SKP1P63208 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SKP1P63208 CLK1-215ENST00000621181 1843 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SKP1P63208 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SKP1P63208 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
SKP1P63208 PTBP2-203ENST00000426398 3027 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
SKP1P63208 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC7.32□□□□□ -1.24
SKP1P63208 DLD-205ENST00000440410 1993 ntTSL 2 BASIC7.32□□□□□ -1.24
SKP1P63208 CCT5-201ENST00000280326 3675 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SKP1P63208 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SKP1P63208 TMEM126B-201ENST00000358867 989 ntAPPRIS P3 TSL 2 BASIC7.32□□□□□ -1.24
SKP1P63208 RNA5SP389-201ENST00000362610 115 ntBASIC7.32□□□□□ -1.24
SKP1P63208 RNA5SP226-201ENST00000362653 115 ntBASIC7.32□□□□□ -1.24
SKP1P63208 RNA5SP161-201ENST00000363871 115 ntBASIC7.32□□□□□ -1.24
SKP1P63208 S100A13-202ENST00000392622 547 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
SKP1P63208 C5orf24-203ENST00000435259 851 ntAPPRIS P1 TSL 3 BASIC7.32□□□□□ -1.24
SKP1P63208 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC7.32□□□□□ -1.24
SKP1P63208 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC7.32□□□□□ -1.24
SKP1P63208 MIR4500HG-204ENST00000453832 827 ntTSL 3 BASIC7.32□□□□□ -1.24
SKP1P63208 RPL7AP56-201ENST00000476420 791 ntBASIC7.32□□□□□ -1.24
SKP1P63208 LINC01096-201ENST00000501050 1263 ntTSL 2 BASIC7.32□□□□□ -1.24
SKP1P63208 AC079768.1-201ENST00000503181 711 ntBASIC7.32□□□□□ -1.24
SKP1P63208 AC136604.3-202ENST00000514793 485 ntTSL 5 BASIC7.32□□□□□ -1.24
SKP1P63208 PSD2-AS1-201ENST00000515306 412 ntTSL 3 BASIC7.32□□□□□ -1.24
SKP1P63208 RNA5SP287-201ENST00000516358 103 ntBASIC7.32□□□□□ -1.24
SKP1P63208 RN7SKP105-201ENST00000517192 314 ntBASIC7.32□□□□□ -1.24
SKP1P63208 AC011726.3-201ENST00000518031 568 ntTSL 4 BASIC7.32□□□□□ -1.24
SKP1P63208 AC006205.2-201ENST00000538943 373 ntTSL 2 BASIC7.32□□□□□ -1.24
SKP1P63208 SERPINA9-208ENST00000546329 1156 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SKP1P63208 LINC02385-201ENST00000547554 428 ntTSL 5 BASIC7.32□□□□□ -1.24
SKP1P63208 AC009117.3-201ENST00000568136 543 ntTSL 4 BASIC7.32□□□□□ -1.24
SKP1P63208 AC010761.2-202ENST00000582536 391 ntTSL 5 BASIC7.32□□□□□ -1.24
SKP1P63208 AP004247.4-201ENST00000608484 942 ntBASIC7.32□□□□□ -1.24
SKP1P63208 LINC01396-201ENST00000609099 527 ntTSL 3 BASIC7.32□□□□□ -1.24
SKP1P63208 AC109587.1-213ENST00000610844 652 ntTSL 5 BASIC7.32□□□□□ -1.24
SKP1P63208 AC012560.1-201ENST00000634930 459 ntTSL 3 BASIC7.32□□□□□ -1.24
SKP1P63208 LINC00682-204ENST00000637677 931 ntTSL 5 BASIC7.32□□□□□ -1.24
SKP1P63208 CENPL-203ENST00000367710 1771 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SKP1P63208 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SKP1P63208 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC7.32□□□□□ -1.24
SKP1P63208 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SKP1P63208 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
SKP1P63208 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SKP1P63208 PIBF1-208ENST00000617689 2882 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SKP1P63208 ZNF680-201ENST00000309683 3022 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SKP1P63208 GABRE-201ENST00000370328 3152 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SKP1P63208 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC7.32□□□□□ -1.24
SKP1P63208 AIM2-202ENST00000368130 1529 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SKP1P63208 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
SKP1P63208 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SKP1P63208 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
SKP1P63208 ARPP21-207ENST00000417925 3086 ntTSL 2 BASIC7.31□□□□□ -1.24
SKP1P63208 NLRP8-202ENST00000590542 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
SKP1P63208 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SKP1P63208 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SKP1P63208 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SKP1P63208 UG0898H09-202ENST00000623646 7040 ntBASIC7.31□□□□□ -1.24
SKP1P63208 AL137918.1-201ENST00000624542 1922 ntBASIC7.31□□□□□ -1.24
SKP1P63208 LINC01091-204ENST00000515769 2204 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SKP1P63208 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC7.31□□□□□ -1.24
SKP1P63208 JAZF1-201ENST00000283928 3125 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SKP1P63208 ZNF438-202ENST00000361310 3144 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
SKP1P63208 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SKP1P63208 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SKP1P63208 KLRB1-201ENST00000229402 1448 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SKP1P63208 MBD3L1-201ENST00000305625 748 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
SKP1P63208 TMCO5A-201ENST00000319669 1274 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
SKP1P63208 TMEM116-201ENST00000355445 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
SKP1P63208 ABI1-206ENST00000376140 1446 ntTSL 5 BASIC7.31□□□□□ -1.24
SKP1P63208 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SKP1P63208 AAMDC-202ENST00000393427 531 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SKP1P63208 TERF1P4-201ENST00000399580 1115 ntBASIC7.31□□□□□ -1.24
SKP1P63208 REG1CP-205ENST00000444841 1710 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SKP1P63208 RPSAP49-201ENST00000445182 886 ntBASIC7.31□□□□□ -1.24
SKP1P63208 GPR141-202ENST00000447769 1270 ntAPPRIS P1 TSL 3 BASIC7.31□□□□□ -1.24
SKP1P63208 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC7.31□□□□□ -1.24
SKP1P63208 VN2R1P-201ENST00000449668 1743 ntBASIC7.31□□□□□ -1.24
SKP1P63208 KIF3AP1-201ENST00000454055 611 ntBASIC7.31□□□□□ -1.24
SKP1P63208 QTRT2-215ENST00000493014 1046 ntTSL 2 BASIC7.31□□□□□ -1.24
SKP1P63208 RN7SL869P-201ENST00000497032 300 ntBASIC7.31□□□□□ -1.24
SKP1P63208 AC023886.1-201ENST00000506057 685 ntTSL 3 BASIC7.31□□□□□ -1.24
SKP1P63208 MEF2C-222ENST00000514028 3393 ntTSL 5 BASIC7.31□□□□□ -1.24
SKP1P63208 RDH10-203ENST00000519380 978 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SKP1P63208 AC022973.2-201ENST00000520146 549 ntTSL 4 BASIC7.31□□□□□ -1.24
SKP1P63208 AAMDC-203ENST00000525034 511 ntTSL 3 BASIC7.31□□□□□ -1.24
SKP1P63208 FXYD2-206ENST00000532119 562 ntAPPRIS P1 TSL 3 BASIC7.31□□□□□ -1.24
SKP1P63208 GLS2-215ENST00000539272 2174 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SKP1P63208 NDFIP1P1-201ENST00000543144 525 ntBASIC7.31□□□□□ -1.24
SKP1P63208 CHCHD3P2-201ENST00000550751 639 ntBASIC7.31□□□□□ -1.24
SKP1P63208 DCAF5-208ENST00000556847 2791 ntTSL 5 BASIC7.31□□□□□ -1.24
SKP1P63208 AL137802.2-201ENST00000562878 1110 ntBASIC7.31□□□□□ -1.24
SKP1P63208 AC027688.2-201ENST00000569009 511 ntTSL 3 BASIC7.31□□□□□ -1.24
SKP1P63208 AC130456.5-201ENST00000569345 510 ntTSL 5 BASIC7.31□□□□□ -1.24
SKP1P63208 CDRT8-201ENST00000579752 467 ntTSL 3 BASIC7.31□□□□□ -1.24
SKP1P63208 LINC01482-201ENST00000585484 2616 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SKP1P63208 Z98949.1-208ENST00000597614 816 ntTSL 5 BASIC7.31□□□□□ -1.24
SKP1P63208 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SKP1P63208 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SKP1P63208 ZNF182-201ENST00000376943 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms