Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 CHCHD7-215ENST00000523061 557 ntTSL 3 BASIC8.31□□□□□ -1.08
UBE4BO95155 AP001124.1-201ENST00000529628 385 ntBASIC8.31□□□□□ -1.08
UBE4BO95155 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC8.31□□□□□ -1.08
UBE4BO95155 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC8.31□□□□□ -1.08
UBE4BO95155 SUPT16H-204ENST00000555943 915 ntTSL 2 BASIC8.31□□□□□ -1.08
UBE4BO95155 AL121820.1-201ENST00000556919 461 ntTSL 5 BASIC8.31□□□□□ -1.08
UBE4BO95155 DNM1P31-201ENST00000564149 696 ntBASIC8.31□□□□□ -1.08
UBE4BO95155 AC092133.1-201ENST00000565828 719 ntBASIC8.31□□□□□ -1.08
UBE4BO95155 ZNF675-202ENST00000596211 581 ntTSL 4 BASIC8.31□□□□□ -1.08
UBE4BO95155 RN7SL760P-201ENST00000607344 270 ntBASIC8.31□□□□□ -1.08
UBE4BO95155 AC243830.3-201ENST00000616810 376 ntBASIC8.31□□□□□ -1.08
UBE4BO95155 MIR6807-201ENST00000621968 92 ntBASIC8.31□□□□□ -1.08
UBE4BO95155 C18orf12-201ENST00000623329 537 ntBASIC8.31□□□□□ -1.08
UBE4BO95155 AC016582.3-206ENST00000636547 207 ntBASIC8.31□□□□□ -1.08
UBE4BO95155 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
UBE4BO95155 ASIC5-201ENST00000537611 1692 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
UBE4BO95155 AC010886.1-201ENST00000437380 2869 ntBASIC8.31□□□□□ -1.08
UBE4BO95155 MEIS1-216ENST00000560281 2773 ntTSL 5 BASIC8.31□□□□□ -1.08
UBE4BO95155 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
UBE4BO95155 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
UBE4BO95155 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
UBE4BO95155 TPD52-204ENST00000517427 2596 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
UBE4BO95155 ADGRE1-201ENST00000250572 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
UBE4BO95155 SMAD5-AS1-201ENST00000297163 1816 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
UBE4BO95155 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
UBE4BO95155 CHAF1B-201ENST00000314103 4480 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
UBE4BO95155 ZNF192P2-201ENST00000402215 1383 ntBASIC8.31□□□□□ -1.08
UBE4BO95155 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC8.31□□□□□ -1.08
UBE4BO95155 GTF2IP1-202ENST00000614592 2047 ntBASIC8.31□□□□□ -1.08
UBE4BO95155 GPR33-201ENST00000399285 1343 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
UBE4BO95155 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC8.31□□□□□ -1.08
UBE4BO95155 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
UBE4BO95155 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
UBE4BO95155 GZMA-201ENST00000274306 894 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
UBE4BO95155 NXT2-204ENST00000372107 937 ntTSL 3 BASIC8.3□□□□□ -1.08
UBE4BO95155 HMGB3P1-201ENST00000393368 573 ntBASIC8.3□□□□□ -1.08
UBE4BO95155 LINC01715-201ENST00000420776 624 ntTSL 2 BASIC8.3□□□□□ -1.08
UBE4BO95155 GYG1P2-201ENST00000426437 1006 ntBASIC8.3□□□□□ -1.08
UBE4BO95155 AC098483.1-201ENST00000438623 955 ntTSL 5 BASIC8.3□□□□□ -1.08
UBE4BO95155 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC8.3□□□□□ -1.08
UBE4BO95155 AL583856.1-201ENST00000454078 1101 ntBASIC8.3□□□□□ -1.08
UBE4BO95155 LINC00518-202ENST00000479822 906 ntTSL 3 BASIC8.3□□□□□ -1.08
UBE4BO95155 ZNF721-203ENST00000506646 935 ntTSL 2 BASIC8.3□□□□□ -1.08
UBE4BO95155 AC006070.1-201ENST00000508151 193 ntBASIC8.3□□□□□ -1.08
UBE4BO95155 AC069360.1-202ENST00000533941 557 ntTSL 3 BASIC8.3□□□□□ -1.08
UBE4BO95155 SNHG1-223ENST00000545440 754 ntTSL 2 BASIC8.3□□□□□ -1.08
UBE4BO95155 DCN-207ENST00000546370 586 ntTSL 3 BASIC8.3□□□□□ -1.08
UBE4BO95155 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC8.3□□□□□ -1.08
UBE4BO95155 MIR6829-201ENST00000620375 67 ntBASIC8.3□□□□□ -1.08
UBE4BO95155 PPP3CB-AS1-214ENST00000620432 654 ntTSL 5 BASIC8.3□□□□□ -1.08
UBE4BO95155 AL355480.4-201ENST00000626823 69 ntBASIC8.3□□□□□ -1.08
UBE4BO95155 AC073488.2-201ENST00000631903 751 ntBASIC8.3□□□□□ -1.08
UBE4BO95155 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC8.3□□□□□ -1.08
UBE4BO95155 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
UBE4BO95155 AL445250.1-203ENST00000641829 1535 ntBASIC8.3□□□□□ -1.08
UBE4BO95155 CSF2RA-206ENST00000381529 1816 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
UBE4BO95155 TRIM51HP-202ENST00000530412 1823 ntBASIC8.3□□□□□ -1.08
UBE4BO95155 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
UBE4BO95155 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
UBE4BO95155 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
UBE4BO95155 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
UBE4BO95155 AL161891.1-201ENST00000621575 4636 ntBASIC8.3□□□□□ -1.08
UBE4BO95155 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC8.3□□□□□ -1.08
UBE4BO95155 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC8.3□□□□□ -1.08
UBE4BO95155 TMEM116-201ENST00000355445 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
UBE4BO95155 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
UBE4BO95155 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
UBE4BO95155 AL357556.1-201ENST00000421884 1388 ntBASIC8.3□□□□□ -1.08
UBE4BO95155 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
UBE4BO95155 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
UBE4BO95155 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
UBE4BO95155 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
UBE4BO95155 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC8.3□□□□□ -1.08
UBE4BO95155 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
UBE4BO95155 RNA5SP297-201ENST00000391029 113 ntBASIC8.29□□□□□ -1.08
UBE4BO95155 BCL2L15-202ENST00000393316 1084 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
UBE4BO95155 RPL5P28-201ENST00000418634 693 ntBASIC8.29□□□□□ -1.08
UBE4BO95155 EEF1A1P34-201ENST00000419888 1267 ntBASIC8.29□□□□□ -1.08
UBE4BO95155 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC8.29□□□□□ -1.08
UBE4BO95155 GAPDHP51-201ENST00000426454 1000 ntBASIC8.29□□□□□ -1.08
UBE4BO95155 CYP2C56P-201ENST00000440076 291 ntBASIC8.29□□□□□ -1.08
UBE4BO95155 RPSAP49-201ENST00000445182 886 ntBASIC8.29□□□□□ -1.08
UBE4BO95155 AC093157.1-202ENST00000446527 1045 ntTSL 3 BASIC8.29□□□□□ -1.08
UBE4BO95155 RPS18P13-201ENST00000461260 454 ntBASIC8.29□□□□□ -1.08
UBE4BO95155 RN7SL751P-201ENST00000473281 284 ntBASIC8.29□□□□□ -1.08
UBE4BO95155 AC127024.1-201ENST00000490847 418 ntBASIC8.29□□□□□ -1.08
UBE4BO95155 AC093821.1-201ENST00000503950 539 ntTSL 4 BASIC8.29□□□□□ -1.08
UBE4BO95155 AC233724.10-201ENST00000510454 409 ntBASIC8.29□□□□□ -1.08
UBE4BO95155 AC095059.2-201ENST00000510601 933 ntBASIC8.29□□□□□ -1.08
UBE4BO95155 ZNF726-203ENST00000525354 806 ntTSL 2 BASIC8.29□□□□□ -1.08
UBE4BO95155 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC8.29□□□□□ -1.08
UBE4BO95155 AC053513.1-201ENST00000543604 738 ntTSL 3 BASIC8.29□□□□□ -1.08
UBE4BO95155 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC8.29□□□□□ -1.08
UBE4BO95155 AC093503.1-202ENST00000598743 478 ntTSL 5 BASIC8.29□□□□□ -1.08
UBE4BO95155 AL022238.3-201ENST00000609279 443 ntBASIC8.29□□□□□ -1.08
UBE4BO95155 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
UBE4BO95155 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
UBE4BO95155 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC8.29□□□□□ -1.08
UBE4BO95155 AC124045.1-201ENST00000606008 1953 ntBASIC8.29□□□□□ -1.08
UBE4BO95155 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms