Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC9.81□□□□□ -0.84
LRCH3Q96II8 AC073488.5-201ENST00000631993 754 ntBASIC9.81□□□□□ -0.84
LRCH3Q96II8 DPP9-203ENST00000594671 3851 ntTSL 5 BASIC9.81□□□□□ -0.84
LRCH3Q96II8 SLC7A7-215ENST00000555702 2272 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LRCH3Q96II8 LRMP-205ENST00000548766 2193 ntAPPRIS P2 TSL 2 BASIC9.81□□□□□ -0.84
LRCH3Q96II8 OR2A20P-204ENST00000641121 2173 ntBASIC9.81□□□□□ -0.84
LRCH3Q96II8 CYP24A1-202ENST00000395954 1438 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LRCH3Q96II8 RNF141-201ENST00000265981 4074 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LRCH3Q96II8 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC9.81□□□□□ -0.84
LRCH3Q96II8 BMS1P1-201ENST00000374336 1332 ntBASIC9.81□□□□□ -0.84
LRCH3Q96II8 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LRCH3Q96II8 AL109810.2-201ENST00000425559 1348 ntAPPRIS P1 TSL 3 BASIC9.81□□□□□ -0.84
LRCH3Q96II8 MTCL1-207ENST00000518815 3963 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LRCH3Q96II8 AMZ2-210ENST00000580753 1339 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
LRCH3Q96II8 LIN52-205ENST00000555028 2776 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LRCH3Q96II8 PYGB-201ENST00000216962 4134 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LRCH3Q96II8 RETSAT-201ENST00000295802 3100 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LRCH3Q96II8 SEMA4A-205ENST00000368286 3135 ntTSL 5 BASIC9.8□□□□□ -0.84
LRCH3Q96II8 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC9.8□□□□□ -0.84
LRCH3Q96II8 ALG9-210ENST00000531154 1930 ntTSL 2 BASIC9.8□□□□□ -0.84
LRCH3Q96II8 SAXO1-203ENST00000542071 1923 ntAPPRIS ALT2 TSL 3 BASIC9.8□□□□□ -0.84
LRCH3Q96II8 MYT1L-203ENST00000407844 3642 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LRCH3Q96II8 THSD4-203ENST00000357769 3403 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LRCH3Q96II8 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
LRCH3Q96II8 PTPN20-202ENST00000374339 1388 ntAPPRIS P4 TSL 1 (best) BASIC9.8□□□□□ -0.84
LRCH3Q96II8 CUL1-202ENST00000409469 2857 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LRCH3Q96II8 TAF8-201ENST00000372977 6680 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
LRCH3Q96II8 ZNF682-203ENST00000397165 3245 ntAPPRIS P2 TSL 2 BASIC9.8□□□□□ -0.84
LRCH3Q96II8 LINC01012-204ENST00000629732 2771 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LRCH3Q96II8 S100A7A-201ENST00000329256 491 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LRCH3Q96II8 NPIPA5-201ENST00000360151 1088 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LRCH3Q96II8 U3.4-201ENST00000363352 213 ntBASIC9.8□□□□□ -0.84
LRCH3Q96II8 ATF3-204ENST00000366983 858 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LRCH3Q96II8 SULT1C4-202ENST00000409309 1045 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LRCH3Q96II8 AC097059.2-201ENST00000414039 592 ntTSL 3 BASIC9.8□□□□□ -0.84
LRCH3Q96II8 AC009303.1-201ENST00000426307 352 ntBASIC9.8□□□□□ -0.84
LRCH3Q96II8 AC010975.2-201ENST00000427781 588 ntBASIC9.8□□□□□ -0.84
LRCH3Q96II8 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC9.8□□□□□ -0.84
LRCH3Q96II8 AL355990.2-201ENST00000440688 508 ntTSL 3 BASIC9.8□□□□□ -0.84
LRCH3Q96II8 CCNJP1-201ENST00000450600 1149 ntBASIC9.8□□□□□ -0.84
LRCH3Q96II8 AL392003.2-201ENST00000451015 679 ntBASIC9.8□□□□□ -0.84
LRCH3Q96II8 AL157400.2-201ENST00000454174 563 ntTSL 2 BASIC9.8□□□□□ -0.84
LRCH3Q96II8 NUTF2P5-201ENST00000475013 379 ntBASIC9.8□□□□□ -0.84
LRCH3Q96II8 AL024509.2-201ENST00000493462 493 ntBASIC9.8□□□□□ -0.84
LRCH3Q96II8 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC9.8□□□□□ -0.84
LRCH3Q96II8 LINC02058-201ENST00000507491 707 ntTSL 3 BASIC9.8□□□□□ -0.84
LRCH3Q96II8 HSD3BP4-201ENST00000511509 1120 ntBASIC9.8□□□□□ -0.84
LRCH3Q96II8 AC022880.2-201ENST00000532664 270 ntBASIC9.8□□□□□ -0.84
LRCH3Q96II8 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC9.8□□□□□ -0.84
LRCH3Q96II8 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC9.8□□□□□ -0.84
LRCH3Q96II8 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC9.8□□□□□ -0.84
LRCH3Q96II8 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC9.8□□□□□ -0.84
LRCH3Q96II8 HNRNPCP1-201ENST00000556181 766 ntBASIC9.8□□□□□ -0.84
LRCH3Q96II8 AC116903.1-201ENST00000557683 539 ntTSL 4 BASIC9.8□□□□□ -0.84
LRCH3Q96II8 AL023284.4-201ENST00000564248 374 ntBASIC9.8□□□□□ -0.84
LRCH3Q96II8 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC9.8□□□□□ -0.84
LRCH3Q96II8 AC012186.1-201ENST00000566702 398 ntBASIC9.8□□□□□ -0.84
LRCH3Q96II8 DSG1-AS1-204ENST00000581856 669 ntTSL 3 BASIC9.8□□□□□ -0.84
LRCH3Q96II8 STARD6-204ENST00000584040 660 ntTSL 3 BASIC9.8□□□□□ -0.84
LRCH3Q96II8 AC008752.3-201ENST00000588113 712 ntBASIC9.8□□□□□ -0.84
LRCH3Q96II8 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC9.8□□□□□ -0.84
LRCH3Q96II8 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC9.8□□□□□ -0.84
LRCH3Q96II8 AC016877.3-201ENST00000606778 504 ntBASIC9.8□□□□□ -0.84
LRCH3Q96II8 AL139220.2-217ENST00000609027 940 ntTSL 5 BASIC9.8□□□□□ -0.84
LRCH3Q96II8 SLC25A15P4-201ENST00000614260 289 ntBASIC9.8□□□□□ -0.84
LRCH3Q96II8 AC009704.2-201ENST00000618739 483 ntBASIC9.8□□□□□ -0.84
LRCH3Q96II8 KCNQ1OT1_2.1-201ENST00000619507 196 ntBASIC9.8□□□□□ -0.84
LRCH3Q96II8 AQP4-208ENST00000622234 891 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LRCH3Q96II8 FRG1KP-201ENST00000623592 341 ntBASIC9.8□□□□□ -0.84
LRCH3Q96II8 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC9.8□□□□□ -0.84
LRCH3Q96II8 MED23-205ENST00000368068 5233 ntAPPRIS P4 TSL 1 (best) BASIC9.8□□□□□ -0.84
LRCH3Q96II8 CD207-201ENST00000410009 1869 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LRCH3Q96II8 GPM6A-221ENST00000515090 1500 ntTSL 2 BASIC9.8□□□□□ -0.84
LRCH3Q96II8 ZFP42-202ENST00000509524 2480 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
LRCH3Q96II8 ZNF860-201ENST00000360311 3098 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
LRCH3Q96II8 ING3-204ENST00000431467 1447 ntTSL 2 BASIC9.8□□□□□ -0.84
LRCH3Q96II8 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
LRCH3Q96II8 HTR4-202ENST00000362016 2979 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LRCH3Q96II8 ZC4H2-203ENST00000447788 2649 ntTSL 2 BASIC9.8□□□□□ -0.84
LRCH3Q96II8 NOP2-207ENST00000537442 2613 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
LRCH3Q96II8 PATE2-201ENST00000358524 1657 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
LRCH3Q96II8 NTRK3-207ENST00000542733 2287 ntTSL 2 BASIC9.8□□□□□ -0.84
LRCH3Q96II8 CYP4F35P-201ENST00000582957 2876 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LRCH3Q96II8 KCNA2-211ENST00000639233 5256 ntTSL 5 BASIC9.8□□□□□ -0.84
LRCH3Q96II8 RAD54L-202ENST00000442598 2549 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
LRCH3Q96II8 EHBP1-201ENST00000263991 5165 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
LRCH3Q96II8 GPR33-201ENST00000399285 1343 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LRCH3Q96II8 AP001347.1-201ENST00000428809 1332 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LRCH3Q96II8 ASPA-201ENST00000263080 5431 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LRCH3Q96II8 TRAK2-201ENST00000332624 6510 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LRCH3Q96II8 AL592158.1-201ENST00000632210 4477 ntBASIC9.8□□□□□ -0.84
LRCH3Q96II8 CXorf57-202ENST00000372548 3861 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LRCH3Q96II8 CDC25C-203ENST00000415130 1556 ntTSL 5 BASIC9.8□□□□□ -0.84
LRCH3Q96II8 CAB39L-205ENST00000409308 2416 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LRCH3Q96II8 CCDC90B-214ENST00000529689 4014 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LRCH3Q96II8 ZNF169-201ENST00000340911 2336 ntTSL 2 BASIC9.79□□□□□ -0.84
LRCH3Q96II8 EZH2-205ENST00000476773 2572 ntTSL 2 BASIC9.79□□□□□ -0.84
LRCH3Q96II8 STEAP3-201ENST00000393106 3915 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
LRCH3Q96II8 GFOD2-202ENST00000602279 5507 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
LRCH3Q96II8 TTF1-201ENST00000334270 3052 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms