Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 BMS1P1-201ENST00000374336 1332 ntBASIC6.46□□□□□ -1.38
AP3S2P59780 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
AP3S2P59780 MMP20-201ENST00000260228 1956 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
AP3S2P59780 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.46□□□□□ -1.38
AP3S2P59780 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
AP3S2P59780 ANKRD55-202ENST00000434982 1518 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
AP3S2P59780 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
AP3S2P59780 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
AP3S2P59780 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
AP3S2P59780 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
AP3S2P59780 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
AP3S2P59780 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
AP3S2P59780 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
AP3S2P59780 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
AP3S2P59780 PPIAP22-201ENST00000358455 498 ntBASIC6.45□□□□□ -1.38
AP3S2P59780 NCALD-203ENST00000395923 3808 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
AP3S2P59780 PPP1R7-204ENST00000402734 883 ntTSL 3 BASIC6.45□□□□□ -1.38
AP3S2P59780 SUMO2P13-201ENST00000403109 272 ntBASIC6.45□□□□□ -1.38
AP3S2P59780 AC103563.8-201ENST00000415716 318 ntBASIC6.45□□□□□ -1.38
AP3S2P59780 AC022400.5-201ENST00000415917 1031 ntTSL 3 BASIC6.45□□□□□ -1.38
AP3S2P59780 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC6.45□□□□□ -1.38
AP3S2P59780 AC011998.2-201ENST00000430884 473 ntBASIC6.45□□□□□ -1.38
AP3S2P59780 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.45□□□□□ -1.38
AP3S2P59780 RPE-207ENST00000435437 858 ntTSL 2 BASIC6.45□□□□□ -1.38
AP3S2P59780 AL049651.1-201ENST00000440798 719 ntTSL 5 BASIC6.45□□□□□ -1.38
AP3S2P59780 AL592182.2-201ENST00000442477 858 ntTSL 2 BASIC6.45□□□□□ -1.38
AP3S2P59780 UBE2D4-206ENST00000446008 783 ntTSL 2 BASIC6.45□□□□□ -1.38
AP3S2P59780 AL355483.1-201ENST00000450469 237 ntTSL 3 BASIC6.45□□□□□ -1.38
AP3S2P59780 AC239859.3-201ENST00000456469 408 ntTSL 5 BASIC6.45□□□□□ -1.38
AP3S2P59780 AC018638.2-201ENST00000471258 403 ntBASIC6.45□□□□□ -1.38
AP3S2P59780 PGBD4P1-201ENST00000473644 407 ntBASIC6.45□□□□□ -1.38
AP3S2P59780 RPL12P42-201ENST00000481802 499 ntBASIC6.45□□□□□ -1.38
AP3S2P59780 RN7SL416P-201ENST00000494042 298 ntBASIC6.45□□□□□ -1.38
AP3S2P59780 DKK2-202ENST00000510463 908 ntTSL 3 BASIC6.45□□□□□ -1.38
AP3S2P59780 OR51A1P-201ENST00000511110 946 ntBASIC6.45□□□□□ -1.38
AP3S2P59780 AC226119.2-201ENST00000513501 530 ntBASIC6.45□□□□□ -1.38
AP3S2P59780 AC087855.2-201ENST00000518217 537 ntTSL 3 BASIC6.45□□□□□ -1.38
AP3S2P59780 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.45□□□□□ -1.38
AP3S2P59780 RPS13-202ENST00000525634 646 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
AP3S2P59780 SMAD3-203ENST00000537194 1147 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
AP3S2P59780 AP003174.3-201ENST00000537926 516 ntBASIC6.45□□□□□ -1.38
AP3S2P59780 AC073651.1-201ENST00000544015 465 ntTSL 3 BASIC6.45□□□□□ -1.38
AP3S2P59780 PCED1B-AS1-204ENST00000547851 780 ntTSL 3 BASIC6.45□□□□□ -1.38
AP3S2P59780 AL358334.3-201ENST00000557343 535 ntTSL 3 BASIC6.45□□□□□ -1.38
AP3S2P59780 PABPN1-208ENST00000557702 778 ntTSL 2 BASIC6.45□□□□□ -1.38
AP3S2P59780 AC073167.1-201ENST00000559303 580 ntTSL 5 BASIC6.45□□□□□ -1.38
AP3S2P59780 AL023284.4-201ENST00000564248 374 ntBASIC6.45□□□□□ -1.38
AP3S2P59780 AC007728.2-202ENST00000567728 1150 ntTSL 3 BASIC6.45□□□□□ -1.38
AP3S2P59780 AC091027.2-201ENST00000578030 179 ntTSL 5 BASIC6.45□□□□□ -1.38
AP3S2P59780 AC016629.2-201ENST00000597341 199 ntBASIC6.45□□□□□ -1.38
AP3S2P59780 LINC00635-210ENST00000600240 714 ntTSL 5 BASIC6.45□□□□□ -1.38
AP3S2P59780 AC007346.1-202ENST00000602826 684 ntBASIC6.45□□□□□ -1.38
AP3S2P59780 AC140658.6-201ENST00000603958 201 ntBASIC6.45□□□□□ -1.38
AP3S2P59780 AL356458.1-201ENST00000604764 465 ntBASIC6.45□□□□□ -1.38
AP3S2P59780 AL391987.5-201ENST00000618472 412 ntBASIC6.45□□□□□ -1.38
AP3S2P59780 ADD3-AS1-203ENST00000625954 472 ntTSL 3 BASIC6.45□□□□□ -1.38
AP3S2P59780 SATB1-AS1-242ENST00000627496 807 ntTSL 5 BASIC6.45□□□□□ -1.38
AP3S2P59780 AC106774.10-201ENST00000638486 599 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
AP3S2P59780 AL596275.2-203ENST00000641951 371 ntBASIC6.45□□□□□ -1.38
AP3S2P59780 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
AP3S2P59780 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC6.45□□□□□ -1.38
AP3S2P59780 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
AP3S2P59780 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.45□□□□□ -1.38
AP3S2P59780 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
AP3S2P59780 TRAF3IP2-AS1-209ENST00000532226 2191 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
AP3S2P59780 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.45□□□□□ -1.38
AP3S2P59780 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
AP3S2P59780 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC6.45□□□□□ -1.38
AP3S2P59780 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
AP3S2P59780 PBLD-207ENST00000495025 1349 ntTSL 5 BASIC6.45□□□□□ -1.38
AP3S2P59780 AC097717.1-227ENST00000594069 1322 ntTSL 5 BASIC6.45□□□□□ -1.38
AP3S2P59780 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC6.45□□□□□ -1.38
AP3S2P59780 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
AP3S2P59780 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
AP3S2P59780 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.45□□□□□ -1.38
AP3S2P59780 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
AP3S2P59780 THNSL1-202ENST00000524413 3788 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
AP3S2P59780 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
AP3S2P59780 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
AP3S2P59780 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.44□□□□□ -1.38
AP3S2P59780 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC6.44□□□□□ -1.38
AP3S2P59780 AL133320.1-201ENST00000621423 2352 ntBASIC6.44□□□□□ -1.38
AP3S2P59780 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.44□□□□□ -1.38
AP3S2P59780 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
AP3S2P59780 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.44□□□□□ -1.38
AP3S2P59780 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
AP3S2P59780 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
AP3S2P59780 NRIR-201ENST00000366140 799 ntTSL 3 BASIC6.44□□□□□ -1.38
AP3S2P59780 RNU1-8P-201ENST00000384328 165 ntBASIC6.44□□□□□ -1.38
AP3S2P59780 ISY1-202ENST00000393292 988 ntTSL 5 BASIC6.44□□□□□ -1.38
AP3S2P59780 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.44□□□□□ -1.38
AP3S2P59780 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC6.44□□□□□ -1.38
AP3S2P59780 FO393418.1-201ENST00000424761 510 ntTSL 4 BASIC6.44□□□□□ -1.38
AP3S2P59780 AL683807.1-201ENST00000427886 445 ntTSL 2 BASIC6.44□□□□□ -1.38
AP3S2P59780 ATP5G1P5-201ENST00000429024 411 ntBASIC6.44□□□□□ -1.38
AP3S2P59780 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
AP3S2P59780 AC092164.1-203ENST00000444501 723 ntTSL 3 BASIC6.44□□□□□ -1.38
AP3S2P59780 AC092570.2-201ENST00000452117 1143 ntBASIC6.44□□□□□ -1.38
AP3S2P59780 HNRNPCP10-201ENST00000457130 884 ntBASIC6.44□□□□□ -1.38
AP3S2P59780 ZBTB20-AS4-201ENST00000472323 675 ntTSL 3 BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms