Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC087280.1-201ENST00000530632 1003 ntBASIC7.97□□□□□ -1.13
SLC1A1P43005 NPIPP1-203ENST00000547107 1071 ntBASIC7.97□□□□□ -1.13
SLC1A1P43005 AC009171.1-201ENST00000572673 266 ntBASIC7.97□□□□□ -1.13
SLC1A1P43005 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC7.97□□□□□ -1.13
SLC1A1P43005 LINC01255-203ENST00000587189 591 ntTSL 4 BASIC7.97□□□□□ -1.13
SLC1A1P43005 LAMTOR5-AS1-205ENST00000587691 441 ntTSL 3 BASIC7.97□□□□□ -1.13
SLC1A1P43005 CR382285.1-202ENST00000604687 547 ntBASIC7.97□□□□□ -1.13
SLC1A1P43005 AL356052.1-201ENST00000605764 376 ntBASIC7.97□□□□□ -1.13
SLC1A1P43005 MIR6745-201ENST00000612694 127 ntBASIC7.97□□□□□ -1.13
SLC1A1P43005 EIF5P2-201ENST00000618904 1035 ntBASIC7.97□□□□□ -1.13
SLC1A1P43005 AC090373.1-201ENST00000623955 603 ntBASIC7.97□□□□□ -1.13
SLC1A1P43005 AC073488.8-201ENST00000631952 757 ntBASIC7.97□□□□□ -1.13
SLC1A1P43005 AL034408.1-201ENST00000637712 664 ntBASIC7.97□□□□□ -1.13
SLC1A1P43005 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
SLC1A1P43005 SORBS1-208ENST00000371241 2055 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
SLC1A1P43005 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
SLC1A1P43005 CUL4B-201ENST00000336592 3109 ntTSL 5 BASIC7.97□□□□□ -1.13
SLC1A1P43005 OR4F15-201ENST00000332238 2119 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
SLC1A1P43005 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SLC1A1P43005 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC7.97□□□□□ -1.13
SLC1A1P43005 HLF-210ENST00000575345 3589 ntTSL 2 BASIC7.97□□□□□ -1.13
SLC1A1P43005 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
SLC1A1P43005 ZNF840P-201ENST00000504759 1996 ntBASIC7.97□□□□□ -1.13
SLC1A1P43005 AC018688.1-201ENST00000636528 1754 ntBASIC7.97□□□□□ -1.13
SLC1A1P43005 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SLC1A1P43005 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SLC1A1P43005 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
SLC1A1P43005 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
SLC1A1P43005 IL12B-201ENST00000231228 2761 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
SLC1A1P43005 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
SLC1A1P43005 ATP9B-208ENST00000586722 1650 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
SLC1A1P43005 AC002090.1-201ENST00000625000 2138 ntBASIC7.96□□□□□ -1.13
SLC1A1P43005 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
SLC1A1P43005 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC7.96□□□□□ -1.13
SLC1A1P43005 CETN2-201ENST00000370277 1454 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
SLC1A1P43005 OR7E11P-202ENST00000642027 1491 ntBASIC7.96□□□□□ -1.13
SLC1A1P43005 DAZ2-208ENST00000400493 3516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
SLC1A1P43005 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC7.96□□□□□ -1.14
SLC1A1P43005 IFT43-201ENST00000238628 816 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
SLC1A1P43005 CEP41-203ENST00000343969 1087 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
SLC1A1P43005 GZMB-203ENST00000382542 666 ntTSL 2 BASIC7.96□□□□□ -1.14
SLC1A1P43005 TMEM126B-202ENST00000393375 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
SLC1A1P43005 U3.31-201ENST00000408113 216 ntBASIC7.96□□□□□ -1.14
SLC1A1P43005 AC004009.1-201ENST00000412413 567 ntTSL 5 BASIC7.96□□□□□ -1.14
SLC1A1P43005 AC003071.2-201ENST00000423857 315 ntBASIC7.96□□□□□ -1.14
SLC1A1P43005 TAAR9-201ENST00000434551 1047 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
SLC1A1P43005 AC022816.1-201ENST00000436469 804 ntTSL 5 BASIC7.96□□□□□ -1.14
SLC1A1P43005 AL137074.1-201ENST00000442640 465 ntBASIC7.96□□□□□ -1.14
SLC1A1P43005 RNF216-IT1-201ENST00000443837 337 ntTSL 5 BASIC7.96□□□□□ -1.14
SLC1A1P43005 EFCAB2-207ENST00000447569 527 ntTSL 2 BASIC7.96□□□□□ -1.14
SLC1A1P43005 RHEBP1-201ENST00000448647 556 ntBASIC7.96□□□□□ -1.14
SLC1A1P43005 ASPA-202ENST00000456349 1090 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
SLC1A1P43005 RN7SL332P-201ENST00000482163 254 ntBASIC7.96□□□□□ -1.14
SLC1A1P43005 RPL41-202ENST00000501597 469 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
SLC1A1P43005 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC7.96□□□□□ -1.14
SLC1A1P43005 AP003721.2-201ENST00000536495 452 ntTSL 3 BASIC7.96□□□□□ -1.14
SLC1A1P43005 NOVA1-209ENST00000547619 947 ntTSL 3 BASIC7.96□□□□□ -1.14
SLC1A1P43005 AC144548.1-201ENST00000549577 324 ntBASIC7.96□□□□□ -1.14
SLC1A1P43005 AC008870.2-201ENST00000568262 1024 ntBASIC7.96□□□□□ -1.14
SLC1A1P43005 AC133565.1-201ENST00000569218 488 ntTSL 3 BASIC7.96□□□□□ -1.14
SLC1A1P43005 AC006557.4-201ENST00000585516 830 ntBASIC7.96□□□□□ -1.14
SLC1A1P43005 LINC00663-205ENST00000589508 432 ntTSL 3 BASIC7.96□□□□□ -1.14
SLC1A1P43005 AC093074.1-201ENST00000590280 556 ntTSL 4 BASIC7.96□□□□□ -1.14
SLC1A1P43005 LINC00674-202ENST00000590734 160 ntBASIC7.96□□□□□ -1.14
SLC1A1P43005 AC103974.2-201ENST00000611319 778 ntBASIC7.96□□□□□ -1.14
SLC1A1P43005 AC079779.3-218ENST00000612487 940 ntTSL 5 BASIC7.96□□□□□ -1.14
SLC1A1P43005 MIR6834-201ENST00000622807 81 ntBASIC7.96□□□□□ -1.14
SLC1A1P43005 PGAM1P5-203ENST00000626376 313 ntTSL 5 BASIC7.96□□□□□ -1.14
SLC1A1P43005 AL356599.1-202ENST00000626919 218 ntTSL 5 BASIC7.96□□□□□ -1.14
SLC1A1P43005 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC7.96□□□□□ -1.14
SLC1A1P43005 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
SLC1A1P43005 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC7.96□□□□□ -1.14
SLC1A1P43005 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
SLC1A1P43005 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
SLC1A1P43005 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC7.96□□□□□ -1.14
SLC1A1P43005 MS4A6A-208ENST00000528851 1806 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
SLC1A1P43005 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
SLC1A1P43005 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
SLC1A1P43005 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
SLC1A1P43005 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
SLC1A1P43005 AL161891.1-201ENST00000621575 4636 ntBASIC7.96□□□□□ -1.14
SLC1A1P43005 ATP5A1P10-201ENST00000622403 1603 ntBASIC7.96□□□□□ -1.14
SLC1A1P43005 ATM-215ENST00000530958 5718 ntTSL 2 BASIC7.96□□□□□ -1.14
SLC1A1P43005 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
SLC1A1P43005 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
SLC1A1P43005 SAMMSON-222ENST00000641901 2727 ntBASIC7.95□□□□□ -1.14
SLC1A1P43005 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
SLC1A1P43005 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC7.95□□□□□ -1.14
SLC1A1P43005 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
SLC1A1P43005 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SLC1A1P43005 TMSB15B-208ENST00000620307 2286 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SLC1A1P43005 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC7.95□□□□□ -1.14
SLC1A1P43005 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SLC1A1P43005 SLC17A3-203ENST00000361703 1543 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SLC1A1P43005 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC7.95□□□□□ -1.14
SLC1A1P43005 OR9K2-201ENST00000305377 1122 ntBASIC7.95□□□□□ -1.14
SLC1A1P43005 AC104699.1-201ENST00000352271 414 ntTSL 3 BASIC7.95□□□□□ -1.14
SLC1A1P43005 RNA5SP463-201ENST00000363030 120 ntBASIC7.95□□□□□ -1.14
SLC1A1P43005 CFAP61-203ENST00000377293 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
SLC1A1P43005 MIR575-201ENST00000385013 94 ntBASIC7.95□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms