Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 MITF-202ENST00000314589 1993 ntTSL 2 BASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 ZNF345-202ENST00000420450 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 SAMMSON-222ENST00000641901 2727 ntBASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 CCDC30-202ENST00000342022 3098 ntAPPRIS P2 TSL 5 BASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 AC130464.1-201ENST00000416201 1500 ntBASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 EPHA7-201ENST00000369297 1885 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 LARP7-201ENST00000324052 2164 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 TAOK3-209ENST00000537952 2147 ntTSL 2 BASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 AL133279.3-201ENST00000563140 2352 ntBASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 MBTPS2-201ENST00000365779 4457 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 TRAV17-201ENST00000390445 484 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 STAG3L1-201ENST00000404291 496 ntTSL 3 BASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 U3.34-201ENST00000408198 212 ntBASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 RNA5SP265-201ENST00000411023 111 ntBASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 AL031848.1-201ENST00000419034 351 ntTSL 5 BASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 AC006457.1-201ENST00000420733 392 ntBASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 ENTPD3-AS1-201ENST00000420850 791 ntTSL 2 BASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 GAPDHP51-201ENST00000426454 1000 ntBASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 BX119917.1-201ENST00000432517 502 ntBASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 BACE2-IT1-201ENST00000433378 382 ntTSL 5 BASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 MIATNB-204ENST00000437071 1006 ntTSL 3 BASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 ACTP1-201ENST00000440793 383 ntBASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 AL359711.1-201ENST00000441999 123 ntBASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 AC234771.3-201ENST00000454984 622 ntBASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 AC013787.1-201ENST00000460165 307 ntBASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 RPS20P23-201ENST00000461683 354 ntBASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 IL20RB-AS1-201ENST00000462176 562 ntTSL 4 BASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 RPL5P17-201ENST00000469685 877 ntBASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 AC105910.1-201ENST00000482585 483 ntBASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 AL645924.2-201ENST00000508865 900 ntBASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 AP005597.2-201ENST00000526238 341 ntBASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 CLEC4E-206ENST00000545274 730 ntTSL 3 BASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 AC103968.1-201ENST00000557841 573 ntBASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 AC137735.1-201ENST00000581911 419 ntTSL 3 BASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 AC006449.1-201ENST00000616263 571 ntTSL 4 BASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 LINC02086-204ENST00000628006 786 ntTSL 5 BASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 AL359834.1-201ENST00000635660 638 ntTSL 4 BASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 CLEC19A-205ENST00000636231 561 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 LINC00598-212ENST00000637124 905 ntTSL 5 BASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 TRAF3IP2-AS1-209ENST00000532226 2191 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 USP32P2-201ENST00000412260 4329 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 GLRA3-202ENST00000340217 3065 ntAPPRIS ALT1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 NUP214-208ENST00000483497 3275 ntTSL 2 BASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 CETN2-201ENST00000370277 1454 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 AC007388.1-201ENST00000426083 1438 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 ZNF85-202ENST00000328178 2296 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
CCNB1IP1Q9NPC3 LAX1-202ENST00000367217 1356 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
CCNB1IP1Q9NPC3 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
CCNB1IP1Q9NPC3 AC138915.4-201ENST00000565549 4147 ntBASIC7.09□□□□□ -1.27
CCNB1IP1Q9NPC3 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CCNB1IP1Q9NPC3 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC7.09□□□□□ -1.27
CCNB1IP1Q9NPC3 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC7.09□□□□□ -1.27
CCNB1IP1Q9NPC3 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC7.09□□□□□ -1.27
CCNB1IP1Q9NPC3 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC7.09□□□□□ -1.27
CCNB1IP1Q9NPC3 PRKAA1-201ENST00000296800 1134 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CCNB1IP1Q9NPC3 PID1-201ENST00000354069 839 ntTSL 3 BASIC7.09□□□□□ -1.27
CCNB1IP1Q9NPC3 IGBP1-AS1-201ENST00000366397 542 ntTSL 5 BASIC7.09□□□□□ -1.27
CCNB1IP1Q9NPC3 CFAP61-203ENST00000377293 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
CCNB1IP1Q9NPC3 RNA5SP256-201ENST00000390978 113 ntBASIC7.09□□□□□ -1.27
CCNB1IP1Q9NPC3 AL138807.1-201ENST00000400354 459 ntBASIC7.09□□□□□ -1.27
CCNB1IP1Q9NPC3 AL137220.1-201ENST00000431369 661 ntTSL 2 BASIC7.09□□□□□ -1.27
CCNB1IP1Q9NPC3 RPL3P8-201ENST00000432928 1191 ntBASIC7.09□□□□□ -1.27
CCNB1IP1Q9NPC3 NEFLP1-201ENST00000436364 984 ntBASIC7.09□□□□□ -1.27
CCNB1IP1Q9NPC3 GHRL-207ENST00000437422 443 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CCNB1IP1Q9NPC3 LINC01015-204ENST00000445296 399 ntTSL 3 BASIC7.09□□□□□ -1.27
CCNB1IP1Q9NPC3 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CCNB1IP1Q9NPC3 AC013275.1-202ENST00000457436 501 ntTSL 3 BASIC7.09□□□□□ -1.27
CCNB1IP1Q9NPC3 RPS6P25-201ENST00000464444 748 ntBASIC7.09□□□□□ -1.27
CCNB1IP1Q9NPC3 AC018816.1-206ENST00000474544 455 ntTSL 3 BASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms