Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 PPP4R2-207ENST00000495566 559 ntTSL 3 BASIC8.11□□□□□ -1.11
CDK5RAP1Q96SZ6 RN7SL445P-201ENST00000495609 293 ntBASIC8.11□□□□□ -1.11
CDK5RAP1Q96SZ6 LINC01096-201ENST00000501050 1263 ntTSL 2 BASIC8.11□□□□□ -1.11
CDK5RAP1Q96SZ6 GAPDHP61-201ENST00000507324 1005 ntBASIC8.11□□□□□ -1.11
CDK5RAP1Q96SZ6 EIF3KP1-201ENST00000513279 656 ntBASIC8.11□□□□□ -1.11
CDK5RAP1Q96SZ6 NR1I3-233ENST00000515452 1093 ntTSL 2 BASIC8.11□□□□□ -1.11
CDK5RAP1Q96SZ6 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC8.11□□□□□ -1.11
CDK5RAP1Q96SZ6 AC022616.2-201ENST00000523185 300 ntBASIC8.11□□□□□ -1.11
CDK5RAP1Q96SZ6 AP001636.1-201ENST00000531997 1122 ntBASIC8.11□□□□□ -1.11
CDK5RAP1Q96SZ6 AP005597.1-201ENST00000534192 802 ntBASIC8.11□□□□□ -1.11
CDK5RAP1Q96SZ6 AP000619.1-201ENST00000540293 1000 ntBASIC8.11□□□□□ -1.11
CDK5RAP1Q96SZ6 PRR13-203ENST00000546581 810 ntAPPRIS ALT2 TSL 3 BASIC8.11□□□□□ -1.11
CDK5RAP1Q96SZ6 AC079313.2-201ENST00000550474 564 ntTSL 4 BASIC8.11□□□□□ -1.11
CDK5RAP1Q96SZ6 CHCHD3P2-201ENST00000550751 639 ntBASIC8.11□□□□□ -1.11
CDK5RAP1Q96SZ6 AC005154.1-225ENST00000581665 564 ntTSL 4 BASIC8.11□□□□□ -1.11
CDK5RAP1Q96SZ6 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC8.11□□□□□ -1.11
CDK5RAP1Q96SZ6 AC011509.2-201ENST00000592263 627 ntTSL 3 BASIC8.11□□□□□ -1.11
CDK5RAP1Q96SZ6 AC243960.3-201ENST00000599316 580 ntTSL 4 BASIC8.11□□□□□ -1.11
CDK5RAP1Q96SZ6 AC010538.1-201ENST00000615131 663 ntBASIC8.11□□□□□ -1.11
CDK5RAP1Q96SZ6 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
CDK5RAP1Q96SZ6 AC016582.3-206ENST00000636547 207 ntBASIC8.11□□□□□ -1.11
CDK5RAP1Q96SZ6 GANC-206ENST00000566442 2512 ntTSL 2 BASIC8.11□□□□□ -1.11
CDK5RAP1Q96SZ6 CPA4-201ENST00000222482 2797 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDK5RAP1Q96SZ6 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDK5RAP1Q96SZ6 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
CDK5RAP1Q96SZ6 NRG3-206ENST00000545131 2713 ntTSL 5 BASIC8.11□□□□□ -1.11
CDK5RAP1Q96SZ6 ZNF878-201ENST00000547628 1734 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
CDK5RAP1Q96SZ6 EPHB2-201ENST00000374627 4014 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
CDK5RAP1Q96SZ6 C1S-205ENST00000406697 3076 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
CDK5RAP1Q96SZ6 OLFML1-201ENST00000329293 2792 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 AP000941.1-201ENST00000530198 1388 ntTSL 3 BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 KIT-201ENST00000288135 5186 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 ABLIM3-207ENST00000508983 2011 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 Z82209.2-201ENST00000623410 2012 ntBASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 FOLH1-213ENST00000533034 2225 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 TDRD12-201ENST00000421545 1317 ntTSL 5 BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 STAT2-202ENST00000418572 1548 ntTSL 2 BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 ZNF396-201ENST00000306346 2788 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 WFDC8-201ENST00000289953 1069 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 RNA5SP378-201ENST00000363646 120 ntBASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 MUC1-205ENST00000368389 543 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 MUC1-206ENST00000368390 804 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 MUC1-209ENST00000368396 516 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 MUC1-210ENST00000368398 729 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 CARD17-201ENST00000375707 466 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 MIR181C-201ENST00000384881 110 ntBASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 SULT1C4-202ENST00000409309 1045 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 AL390856.1-201ENST00000412174 628 ntTSL 2 BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 AC099344.1-201ENST00000433548 492 ntBASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 LINC01805-201ENST00000436433 572 ntTSL 5 BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 ZNF32-AS1-201ENST00000453284 434 ntTSL 5 BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 AL590369.1-201ENST00000455074 470 ntTSL 2 BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 RN7SL213P-201ENST00000463482 317 ntBASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 RN7SL338P-201ENST00000481467 293 ntBASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 NDUFS5P2-201ENST00000484004 306 ntBASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 LINC02024-202ENST00000493545 483 ntTSL 3 BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 AC034206.1-201ENST00000509372 474 ntTSL 3 BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 AC012560.1-203ENST00000510550 595 ntTSL 4 BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 OR7E83P-201ENST00000511021 970 ntBASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 AC104123.1-203ENST00000513158 575 ntTSL 3 BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 MTND6P19-201ENST00000519399 524 ntBASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 AP000880.1-201ENST00000529416 743 ntTSL 3 BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 AC090589.2-201ENST00000532022 332 ntTSL 3 BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 HNRNPC-226ENST00000556628 1156 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 AC109460.4-201ENST00000561471 454 ntTSL 3 BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 AC092133.1-201ENST00000565828 719 ntBASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 AC026254.4-201ENST00000581118 454 ntTSL 2 BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 AC005154.1-216ENST00000582145 1101 ntTSL 5 BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 AC010761.2-202ENST00000582536 391 ntTSL 5 BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 AC005884.1-201ENST00000588604 429 ntTSL 5 BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 AC090330.1-201ENST00000588646 764 ntBASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 OR6L2P-201ENST00000608207 925 ntBASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 AC012488.1-201ENST00000611221 640 ntBASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 IGKV1OR1-1-201ENST00000613775 347 ntBASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 AL109954.1-201ENST00000619495 557 ntTSL 4 BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 AP003068.4-201ENST00000623192 802 ntBASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 AC024475.4-201ENST00000635144 1206 ntTSL 5 BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 EFCAB7-201ENST00000371088 2313 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 OR7E11P-202ENST00000642027 1491 ntBASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 AL133467.3-203ENST00000461160 3574 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 DDX24-201ENST00000330836 2738 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 OR2A20P-201ENST00000479887 2913 ntBASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 FUT10-206ENST00000518672 3115 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 TMEM99-204ENST00000622451 2073 ntAPPRIS P2 TSL 2 BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 C1orf158-203ENST00000614859 3549 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 LRRC37A11P-202ENST00000579258 3717 ntBASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 ZNF182-201ENST00000376943 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 C1orf131-203ENST00000366651 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 CSNK2A3-201ENST00000528848 1416 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 MED23-209ENST00000539158 1636 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 AC016722.2-201ENST00000429761 1835 ntTSL 2 BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 CACNB2-213ENST00000612134 3825 ntTSL 5 BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms