Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 AL669831.5-203ENST00000589899 809 ntTSL 510.16□□□□□ -0.786e-8■■□□□ 12.2
PRPF8Q6P2Q9 MDC1-207ENST00000492462 819 ntTSL 310.14□□□□□ -0.796e-8■■□□□ 12.2
PRPF8Q6P2Q9 NPHP4-207ENST00000470763 3156 ntTSL 210.13□□□□□ -0.796e-8■■□□□ 12.2
PRPF8Q6P2Q9 MYL5-201ENST00000400159 666 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.796e-8■■□□□ 12.2
PRPF8Q6P2Q9 HP-203ENST00000357763 1482 ntTSL 5 BASIC10.11□□□□□ -0.796e-8■■□□□ 12.2
PRPF8Q6P2Q9 PHF20-208ENST00000461405 550 ntTSL 210.08□□□□□ -0.86e-8■■□□□ 12.2
PRPF8Q6P2Q9 CTNND1-238ENST00000534647 866 ntTSL 510.05□□□□□ -0.84e-6■■□□□ 12.2
PRPF8Q6P2Q9 HP-217ENST00000576168 1067 ntTSL 210.01□□□□□ -0.816e-8■■□□□ 12.2
PRPF8Q6P2Q9 CTNND1-224ENST00000530068 579 ntTSL 49.91□□□□□ -0.824e-6■■□□□ 12.2
PRPF8Q6P2Q9 HP-214ENST00000568417 280 ntTSL 49.75□□□□□ -0.856e-8■■□□□ 12.2
PRPF8Q6P2Q9 HP-216ENST00000570083 1270 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.856e-8■■□□□ 12.2
PRPF8Q6P2Q9 MYL5-207ENST00000507804 829 ntTSL 39.73□□□□□ -0.856e-8■■□□□ 12.2
PRPF8Q6P2Q9 HP-205ENST00000561927 822 ntTSL 29.68□□□□□ -0.866e-8■■□□□ 12.2
PRPF8Q6P2Q9 RFFL-204ENST00000414419 559 ntTSL 49.59□□□□□ -0.876e-8■■□□□ 12.2
PRPF8Q6P2Q9 ZNF689-204ENST00000565440 1153 ntTSL 29.58□□□□□ -0.886e-8■■□□□ 12.2
PRPF8Q6P2Q9 TRAPPC4-204ENST00000524797 1924 ntTSL 29.56□□□□□ -0.886e-8■■□□□ 12.2
PRPF8Q6P2Q9 HELZ-212ENST00000584641 1101 ntTSL 1 (best)9.54□□□□□ -0.883e-10■■□□□ 12.2
PRPF8Q6P2Q9 DPP4-211ENST00000628861 433 ntTSL 5 BASIC9.52□□□□□ -0.896e-8■■□□□ 12.2
PRPF8Q6P2Q9 MLYCD-202ENST00000569024 4489 nt9.5□□□□□ -0.896e-8■■□□□ 12.2
PRPF8Q6P2Q9 MDC1-201ENST00000376406 7576 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.96e-8■■□□□ 12.2
PRPF8Q6P2Q9 RFFL-209ENST00000581265 596 ntTSL 49.3□□□□□ -0.926e-8■■□□□ 12.2
PRPF8Q6P2Q9 HP-202ENST00000355906 1443 ntAPPRIS P4 TSL 1 (best) BASIC9.11□□□□□ -0.956e-8■■□□□ 12.2
PRPF8Q6P2Q9 ZNF689-202ENST00000563304 1207 ntTSL 1 (best)9.04□□□□□ -0.966e-8■■□□□ 12.2
PRPF8Q6P2Q9 HP-209ENST00000565574 1187 ntAPPRIS ALT1 TSL 1 (best) BASIC8.98□□□□□ -0.976e-8■■□□□ 12.2
PRPF8Q6P2Q9 HP-218ENST00000613898 1107 ntTSL 1 (best) BASIC8.81□□□□□ -16e-8■■□□□ 12.2
PRPF8Q6P2Q9 HP-201ENST00000228226 960 ntTSL 5 BASIC8.62□□□□□ -1.036e-8■■□□□ 12.2
PRPF8Q6P2Q9 DGAT2-203ENST00000603276 747 ntTSL 58.37□□□□□ -1.076e-8■■□□□ 12.2
PRPF8Q6P2Q9 AL669831.5-204ENST00000609830 669 ntTSL 58.37□□□□□ -1.076e-8■■□□□ 12.2
PRPF8Q6P2Q9 NIF3L1-202ENST00000409020 1680 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.096e-8■■□□□ 12.2
PRPF8Q6P2Q9 DGAT2-205ENST00000603865 2678 ntTSL 28.18□□□□□ -1.16e-8■■□□□ 12.2
PRPF8Q6P2Q9 NIF3L1-204ENST00000409357 1679 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.126e-8■■□□□ 12.2
PRPF8Q6P2Q9 NIF3L1-206ENST00000416651 967 ntTSL 2 BASIC8.03□□□□□ -1.126e-8■■□□□ 12.2
PRPF8Q6P2Q9 HP-204ENST00000398131 1252 ntAPPRIS ALT1 TSL 1 (best) BASIC8.02□□□□□ -1.136e-8■■□□□ 12.2
PRPF8Q6P2Q9 HP-212ENST00000567185 1251 ntTSL 57.99□□□□□ -1.136e-8■■□□□ 12.2
PRPF8Q6P2Q9 MAML1-202ENST00000507385 392 ntTSL 27.95□□□□□ -1.146e-8■■□□□ 12.2
PRPF8Q6P2Q9 RFFL-210ENST00000582308 398 ntTSL 37.94□□□□□ -1.146e-8■■□□□ 12.2
PRPF8Q6P2Q9 NAA60-210ENST00000571696 626 ntTSL 47.93□□□□□ -1.146e-8■■□□□ 12.2
PRPF8Q6P2Q9 DGAT2-204ENST00000603363 5926 ntTSL 27.91□□□□□ -1.146e-8■■□□□ 12.2
PRPF8Q6P2Q9 DCAF8-217ENST00000497354 738 ntTSL 57.86□□□□□ -1.151e-19■■□□□ 12.2
PRPF8Q6P2Q9 NIF3L1-208ENST00000436412 479 ntTSL 37.8□□□□□ -1.166e-8■■□□□ 12.2
PRPF8Q6P2Q9 HP-207ENST00000562526 685 ntTSL 3 BASIC7.67□□□□□ -1.186e-8■■□□□ 12.2
PRPF8Q6P2Q9 MIA3-212ENST00000495210 731 ntTSL 57.34□□□□□ -1.232e-6■■□□□ 12.2
PRPF8Q6P2Q9 HP-213ENST00000567612 1232 ntTSL 57.06□□□□□ -1.286e-8■■□□□ 12.2
PRPF8Q6P2Q9 ADH4-201ENST00000265512 1993 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.296e-8■■□□□ 12.2
PRPF8Q6P2Q9 ADH4-211ENST00000512499 946 ntTSL 56.96□□□□□ -1.296e-8■■□□□ 12.2
PRPF8Q6P2Q9 ADH4-204ENST00000504125 665 ntTSL 56.95□□□□□ -1.36e-8■■□□□ 12.2
PRPF8Q6P2Q9 MAML1-203ENST00000511027 890 ntTSL 36.61□□□□□ -1.356e-8■■□□□ 12.2
PRPF8Q6P2Q9 HP-208ENST00000564499 695 ntTSL 36.61□□□□□ -1.356e-8■■□□□ 12.2
PRPF8Q6P2Q9 ADH4-202ENST00000503416 708 ntTSL 26.6□□□□□ -1.356e-8■■□□□ 12.2
PRPF8Q6P2Q9 ADH4-208ENST00000506705 1340 ntTSL 56.2□□□□□ -1.426e-8■■□□□ 12.2
PRPF8Q6P2Q9 ADH4-206ENST00000504894 489 ntTSL 56.1□□□□□ -1.436e-8■■□□□ 12.2
PRPF8Q6P2Q9 TTLL5-206ENST00000554487 556 ntTSL 36.09□□□□□ -1.436e-8■■□□□ 12.2
PRPF8Q6P2Q9 PARP11-205ENST00000450737 539 ntTSL 25.97□□□□□ -1.456e-8■■□□□ 12.2
PRPF8Q6P2Q9 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC5.8□□□□□ -1.486e-8■■□□□ 12.2
PRPF8Q6P2Q9 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC5.55□□□□□ -1.526e-8■■□□□ 12.2
PRPF8Q6P2Q9 HP-211ENST00000566821 3024 ntTSL 25.34□□□□□ -1.556e-8■■□□□ 12.2
PRPF8Q6P2Q9 PCMTD2-206ENST00000609297 584 ntTSL 45.15□□□□□ -1.586e-8■■□□□ 12.2
PRPF8Q6P2Q9 ADH4-209ENST00000508393 2151 ntTSL 2 BASIC5.1□□□□□ -1.596e-8■■□□□ 12.2
PRPF8Q6P2Q9 HP-206ENST00000562488 551 ntTSL 54.72□□□□□ -1.656e-8■■□□□ 12.2
PRPF8Q6P2Q9 HP-210ENST00000565807 935 ntTSL 24.72□□□□□ -1.656e-8■■□□□ 12.2
PRPF8Q6P2Q9 SCAF8-206ENST00000479234 281 ntTSL 54.61□□□□□ -1.676e-8■■□□□ 12.2
PRPF8Q6P2Q9 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.676e-8■■□□□ 12.2
PRPF8Q6P2Q9 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.35□□□□□ -1.716e-8■■□□□ 12.2
PRPF8Q6P2Q9 BAZ2A-207ENST00000549327 421 ntTSL 23.58□□□□□ -1.846e-8■■□□□ 12.2
PRPF8Q6P2Q9 WWP1-204ENST00000520374 681 ntTSL 53.33□□□□□ -1.886e-8■■□□□ 12.2
PRPF8Q6P2Q9 HECTD1-207ENST00000554850 382 ntTSL 32.73□□□□□ -1.976e-8■■□□□ 12.2
PRPF8Q6P2Q9 TRAPPC4-207ENST00000526141 392 ntTSL 31.03□□□□□ -2.246e-8■■□□□ 12.2
PRPF8Q6P2Q9 ADH4-203ENST00000503944 304 ntTSL 50.59□□□□□ -2.316e-8■■□□□ 12.2
PRPF8Q6P2Q9 CBR4-206ENST00000509108 546 ntTSL 30.22□□□□□ -2.376e-8■■□□□ 12.2
PRPF8Q6P2Q9 SENP6-210ENST00000487548 427 ntTSL 2-0.93□□□□□ -2.566e-8■■□□□ 12.2
PRPF8Q6P2Q9 ADH4-205ENST00000504581 315 ntTSL 3-0.97□□□□□ -2.566e-8■■□□□ 12.2
PRPF8Q6P2Q9 TRUB2-202ENST00000460320 933 ntTSL 210.8□□□□□ -0.682e-6■■□□□ 12.2
PRPF8Q6P2Q9 TRUB2-201ENST00000372890 5719 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.972e-6■■□□□ 12.2
PRPF8Q6P2Q9 CARS-209ENST00000470221 2466 ntTSL 214.47□□□□□ -0.094e-7■■□□□ 12.2
PRPF8Q6P2Q9 CARS-208ENST00000466442 2671 ntTSL 213.08□□□□□ -0.324e-7■■□□□ 12.2
PRPF8Q6P2Q9 WDR97-206ENST00000534167 7119 ntTSL 1 (best)12.99□□□□□ -0.334e-6■■□□□ 12.2
PRPF8Q6P2Q9 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.564e-6■■□□□ 12.2
PRPF8Q6P2Q9 SERPINA5-209ENST00000555681 618 ntTSL 211.43□□□□□ -0.583e-10■■□□□ 12.2
PRPF8Q6P2Q9 SERPINA5-202ENST00000553511 574 ntTSL 211.31□□□□□ -0.63e-10■■□□□ 12.2
PRPF8Q6P2Q9 WDR97-202ENST00000525150 4311 ntTSL 211.31□□□□□ -0.64e-6■■□□□ 12.2
PRPF8Q6P2Q9 WDR97-203ENST00000528691 4491 ntTSL 211.27□□□□□ -0.614e-6■■□□□ 12.2
PRPF8Q6P2Q9 BCAM-207ENST00000590108 429 ntTSL 29.14□□□□□ -0.953e-10■■□□□ 12.2
PRPF8Q6P2Q9 SERPINA5-204ENST00000554220 586 ntTSL 48.71□□□□□ -1.013e-10■■□□□ 12.2
PRPF8Q6P2Q9 SERPINA5-206ENST00000554633 533 ntTSL 48.48□□□□□ -1.053e-10■■□□□ 12.2
PRPF8Q6P2Q9 CARS-210ENST00000484484 1151 ntTSL 58.13□□□□□ -1.114e-7■■□□□ 12.2
PRPF8Q6P2Q9 NBR1-203ENST00000585505 3295 ntTSL 26.19□□□□□ -1.422e-6■■□□□ 12.2
PRPF8Q6P2Q9 CDR2-205ENST00000567010 361 ntTSL 24.14□□□□□ -1.753e-8■■□□□ 12.2
PRPF8Q6P2Q9 TNFRSF10B-208ENST00000523752 3328 ntTSL 1 (best)6.46□□□□□ -1.374e-8■■□□□ 12.2
PRPF8Q6P2Q9 YIF1A-209ENST00000494836 540 ntTSL 213.67□□□□□ -0.223e-7■■□□□ 12.2
PRPF8Q6P2Q9 YIF1A-208ENST00000485820 653 ntTSL 212.77□□□□□ -0.373e-7■■□□□ 12.2
PRPF8Q6P2Q9 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC12.76□□□□□ -0.373e-7■■□□□ 12.2
PRPF8Q6P2Q9 YIF1A-211ENST00000526497 516 ntTSL 512.34□□□□□ -0.433e-7■■□□□ 12.2
PRPF8Q6P2Q9 ANKRD12-208ENST00000581758 323 ntTSL 5-0.67□□□□□ -2.522e-7■■□□□ 12.2
PRPF8Q6P2Q9 DCAF11-232ENST00000560713 543 ntTSL 414.16□□□□□ -0.142e-9■■□□□ 12.2
PRPF8Q6P2Q9 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.57□□□□□ -1.841e-6■■□□□ 12.2
PRPF8Q6P2Q9 PCNP-207ENST00000498274 786 ntTSL 216.08■□□□□ 0.172e-6■■□□□ 12.2
PRPF8Q6P2Q9 PCNP-202ENST00000460231 2165 ntTSL 1 (best)11.68□□□□□ -0.542e-6■■□□□ 12.2
PRPF8Q6P2Q9 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.582e-6■■□□□ 12.2
PRPF8Q6P2Q9 PCNP-205ENST00000470490 589 ntTSL 511.44□□□□□ -0.582e-6■■□□□ 12.2
PRPF8Q6P2Q9 PCNP-204ENST00000469941 2028 ntTSL 1 (best) BASIC9.58□□□□□ -0.882e-6■■□□□ 12.2
Retrieved 100 of 73,762 protein–RNA pairs in 1026 ms