Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HCFC2Q9Y5Z7 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
HCFC2Q9Y5Z7 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HCFC2Q9Y5Z7 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HCFC2Q9Y5Z7 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HCFC2Q9Y5Z7 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC21.15■□□□□ 0.98
HCFC2Q9Y5Z7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HCFC2Q9Y5Z7 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.15■□□□□ 0.98
HCFC2Q9Y5Z7 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.15■□□□□ 0.98
HCFC2Q9Y5Z7 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
HCFC2Q9Y5Z7 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HCFC2Q9Y5Z7 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HCFC2Q9Y5Z7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HCFC2Q9Y5Z7 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
HCFC2Q9Y5Z7 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.98
HCFC2Q9Y5Z7 LINC01568-207ENST00000641790 1380 ntBASIC21.14■□□□□ 0.98
HCFC2Q9Y5Z7 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
HCFC2Q9Y5Z7 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.14■□□□□ 0.97
HCFC2Q9Y5Z7 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HCFC2Q9Y5Z7 AC113347.1-201ENST00000413321 391 ntBASIC21.14■□□□□ 0.97
HCFC2Q9Y5Z7 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HCFC2Q9Y5Z7 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.14■□□□□ 0.97
HCFC2Q9Y5Z7 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
HCFC2Q9Y5Z7 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
HCFC2Q9Y5Z7 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC21.14■□□□□ 0.97
HCFC2Q9Y5Z7 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
HCFC2Q9Y5Z7 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.14■□□□□ 0.97
HCFC2Q9Y5Z7 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HCFC2Q9Y5Z7 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HCFC2Q9Y5Z7 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HCFC2Q9Y5Z7 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HCFC2Q9Y5Z7 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HCFC2Q9Y5Z7 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HCFC2Q9Y5Z7 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
HCFC2Q9Y5Z7 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HCFC2Q9Y5Z7 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.13■□□□□ 0.97
HCFC2Q9Y5Z7 DUT-205ENST00000558813 769 ntTSL 2 BASIC21.13■□□□□ 0.97
HCFC2Q9Y5Z7 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC21.13■□□□□ 0.97
HCFC2Q9Y5Z7 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC21.13■□□□□ 0.97
HCFC2Q9Y5Z7 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.13■□□□□ 0.97
HCFC2Q9Y5Z7 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HCFC2Q9Y5Z7 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
HCFC2Q9Y5Z7 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HCFC2Q9Y5Z7 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HCFC2Q9Y5Z7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HCFC2Q9Y5Z7 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.13■□□□□ 0.97
HCFC2Q9Y5Z7 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HCFC2Q9Y5Z7 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
HCFC2Q9Y5Z7 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HCFC2Q9Y5Z7 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.12■□□□□ 0.97
HCFC2Q9Y5Z7 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.12■□□□□ 0.97
HCFC2Q9Y5Z7 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.12■□□□□ 0.97
HCFC2Q9Y5Z7 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HCFC2Q9Y5Z7 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.12■□□□□ 0.97
HCFC2Q9Y5Z7 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HCFC2Q9Y5Z7 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
HCFC2Q9Y5Z7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
HCFC2Q9Y5Z7 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HCFC2Q9Y5Z7 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.12■□□□□ 0.97
HCFC2Q9Y5Z7 AL390955.1-201ENST00000428694 934 ntBASIC21.12■□□□□ 0.97
HCFC2Q9Y5Z7 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HCFC2Q9Y5Z7 KRT18P57-201ENST00000443599 1254 ntBASIC21.12■□□□□ 0.97
HCFC2Q9Y5Z7 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.12■□□□□ 0.97
HCFC2Q9Y5Z7 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.12■□□□□ 0.97
HCFC2Q9Y5Z7 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HCFC2Q9Y5Z7 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
HCFC2Q9Y5Z7 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HCFC2Q9Y5Z7 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HCFC2Q9Y5Z7 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HCFC2Q9Y5Z7 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.12■□□□□ 0.97
HCFC2Q9Y5Z7 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HCFC2Q9Y5Z7 CYP2D8P-201ENST00000433633 1490 ntBASIC21.12■□□□□ 0.97
HCFC2Q9Y5Z7 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HCFC2Q9Y5Z7 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.12■□□□□ 0.97
HCFC2Q9Y5Z7 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HCFC2Q9Y5Z7 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HCFC2Q9Y5Z7 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.12■□□□□ 0.97
HCFC2Q9Y5Z7 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HCFC2Q9Y5Z7 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
HCFC2Q9Y5Z7 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HCFC2Q9Y5Z7 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
HCFC2Q9Y5Z7 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HCFC2Q9Y5Z7 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.11■□□□□ 0.97
HCFC2Q9Y5Z7 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HCFC2Q9Y5Z7 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.11■□□□□ 0.97
HCFC2Q9Y5Z7 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HCFC2Q9Y5Z7 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.11■□□□□ 0.97
HCFC2Q9Y5Z7 NAPSB-206ENST00000562112 1266 ntBASIC21.11■□□□□ 0.97
HCFC2Q9Y5Z7 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.11■□□□□ 0.97
HCFC2Q9Y5Z7 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HCFC2Q9Y5Z7 CR392000.1-201ENST00000624770 1228 ntBASIC21.11■□□□□ 0.97
HCFC2Q9Y5Z7 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
HCFC2Q9Y5Z7 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HCFC2Q9Y5Z7 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.11■□□□□ 0.97
HCFC2Q9Y5Z7 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HCFC2Q9Y5Z7 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HCFC2Q9Y5Z7 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
HCFC2Q9Y5Z7 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HCFC2Q9Y5Z7 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HCFC2Q9Y5Z7 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms