Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HRH3Q9Y5N1 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
HRH3Q9Y5N1 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.55■□□□□ 0.56
HRH3Q9Y5N1 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HRH3Q9Y5N1 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HRH3Q9Y5N1 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.55■□□□□ 0.56
HRH3Q9Y5N1 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
HRH3Q9Y5N1 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HRH3Q9Y5N1 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HRH3Q9Y5N1 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HRH3Q9Y5N1 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HRH3Q9Y5N1 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HRH3Q9Y5N1 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HRH3Q9Y5N1 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
HRH3Q9Y5N1 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.55■□□□□ 0.56
HRH3Q9Y5N1 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
HRH3Q9Y5N1 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HRH3Q9Y5N1 AL589743.5-201ENST00000616611 1050 ntBASIC18.55■□□□□ 0.56
HRH3Q9Y5N1 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HRH3Q9Y5N1 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.55■□□□□ 0.56
HRH3Q9Y5N1 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
HRH3Q9Y5N1 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
HRH3Q9Y5N1 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HRH3Q9Y5N1 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HRH3Q9Y5N1 KRT8P36-201ENST00000489121 1440 ntBASIC18.55■□□□□ 0.56
HRH3Q9Y5N1 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
HRH3Q9Y5N1 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HRH3Q9Y5N1 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HRH3Q9Y5N1 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HRH3Q9Y5N1 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.54■□□□□ 0.56
HRH3Q9Y5N1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HRH3Q9Y5N1 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.54■□□□□ 0.56
HRH3Q9Y5N1 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HRH3Q9Y5N1 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HRH3Q9Y5N1 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HRH3Q9Y5N1 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HRH3Q9Y5N1 AC007225.1-201ENST00000566331 1836 ntBASIC18.54■□□□□ 0.56
HRH3Q9Y5N1 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.54■□□□□ 0.56
HRH3Q9Y5N1 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HRH3Q9Y5N1 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
HRH3Q9Y5N1 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.54■□□□□ 0.56
HRH3Q9Y5N1 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.54■□□□□ 0.56
HRH3Q9Y5N1 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
HRH3Q9Y5N1 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.54■□□□□ 0.56
HRH3Q9Y5N1 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.54■□□□□ 0.56
HRH3Q9Y5N1 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.54■□□□□ 0.56
HRH3Q9Y5N1 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HRH3Q9Y5N1 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.54■□□□□ 0.56
HRH3Q9Y5N1 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.54■□□□□ 0.56
HRH3Q9Y5N1 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.54■□□□□ 0.56
HRH3Q9Y5N1 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
HRH3Q9Y5N1 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HRH3Q9Y5N1 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
HRH3Q9Y5N1 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.53■□□□□ 0.56
HRH3Q9Y5N1 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HRH3Q9Y5N1 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HRH3Q9Y5N1 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HRH3Q9Y5N1 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HRH3Q9Y5N1 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.53■□□□□ 0.56
HRH3Q9Y5N1 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
HRH3Q9Y5N1 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HRH3Q9Y5N1 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
HRH3Q9Y5N1 AC026366.1-201ENST00000488803 879 ntBASIC18.53■□□□□ 0.56
HRH3Q9Y5N1 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.53■□□□□ 0.56
HRH3Q9Y5N1 AC008403.3-201ENST00000598924 454 ntBASIC18.53■□□□□ 0.56
HRH3Q9Y5N1 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.53■□□□□ 0.56
HRH3Q9Y5N1 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
HRH3Q9Y5N1 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HRH3Q9Y5N1 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
HRH3Q9Y5N1 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HRH3Q9Y5N1 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
HRH3Q9Y5N1 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HRH3Q9Y5N1 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
HRH3Q9Y5N1 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HRH3Q9Y5N1 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HRH3Q9Y5N1 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
HRH3Q9Y5N1 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HRH3Q9Y5N1 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HRH3Q9Y5N1 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HRH3Q9Y5N1 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
HRH3Q9Y5N1 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HRH3Q9Y5N1 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HRH3Q9Y5N1 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.52■□□□□ 0.56
HRH3Q9Y5N1 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HRH3Q9Y5N1 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.52■□□□□ 0.56
HRH3Q9Y5N1 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HRH3Q9Y5N1 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HRH3Q9Y5N1 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.52■□□□□ 0.55
HRH3Q9Y5N1 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HRH3Q9Y5N1 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HRH3Q9Y5N1 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.51■□□□□ 0.55
HRH3Q9Y5N1 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.51■□□□□ 0.55
HRH3Q9Y5N1 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HRH3Q9Y5N1 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HRH3Q9Y5N1 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HRH3Q9Y5N1 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HRH3Q9Y5N1 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.51■□□□□ 0.55
HRH3Q9Y5N1 AL158047.1-201ENST00000445918 881 ntBASIC18.51■□□□□ 0.55
HRH3Q9Y5N1 AC142381.4-202ENST00000563973 229 ntBASIC18.51■□□□□ 0.55
HRH3Q9Y5N1 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms