Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
PCDHGA6Q9Y5G7 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGA6Q9Y5G7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.35■□□□□ 0.69
PCDHGA6Q9Y5G7 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.35■□□□□ 0.69
PCDHGA6Q9Y5G7 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.35■□□□□ 0.69
PCDHGA6Q9Y5G7 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.35■□□□□ 0.69
PCDHGA6Q9Y5G7 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGA6Q9Y5G7 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
PCDHGA6Q9Y5G7 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.35■□□□□ 0.69
PCDHGA6Q9Y5G7 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.35■□□□□ 0.69
PCDHGA6Q9Y5G7 AC092368.3-202ENST00000574180 1591 ntBASIC19.35■□□□□ 0.69
PCDHGA6Q9Y5G7 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.35■□□□□ 0.69
PCDHGA6Q9Y5G7 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGA6Q9Y5G7 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGA6Q9Y5G7 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
PCDHGA6Q9Y5G7 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.35■□□□□ 0.69
PCDHGA6Q9Y5G7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
PCDHGA6Q9Y5G7 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.35■□□□□ 0.69
PCDHGA6Q9Y5G7 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.34■□□□□ 0.69
PCDHGA6Q9Y5G7 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.34■□□□□ 0.69
PCDHGA6Q9Y5G7 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA6Q9Y5G7 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA6Q9Y5G7 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA6Q9Y5G7 AC007952.6-201ENST00000573168 2673 ntBASIC19.34■□□□□ 0.69
PCDHGA6Q9Y5G7 AC003957.1-201ENST00000625108 2673 ntBASIC19.34■□□□□ 0.69
PCDHGA6Q9Y5G7 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA6Q9Y5G7 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA6Q9Y5G7 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA6Q9Y5G7 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.34■□□□□ 0.69
PCDHGA6Q9Y5G7 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
PCDHGA6Q9Y5G7 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.34■□□□□ 0.69
PCDHGA6Q9Y5G7 AL359736.2-201ENST00000621992 437 ntBASIC19.34■□□□□ 0.69
PCDHGA6Q9Y5G7 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
PCDHGA6Q9Y5G7 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.34■□□□□ 0.69
PCDHGA6Q9Y5G7 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA6Q9Y5G7 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA6Q9Y5G7 GABARAPL3-202ENST00000624044 1851 ntBASIC19.34■□□□□ 0.69
PCDHGA6Q9Y5G7 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA6Q9Y5G7 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.34■□□□□ 0.69
PCDHGA6Q9Y5G7 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA6Q9Y5G7 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA6Q9Y5G7 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA6Q9Y5G7 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA6Q9Y5G7 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA6Q9Y5G7 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.34■□□□□ 0.69
PCDHGA6Q9Y5G7 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA6Q9Y5G7 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
PCDHGA6Q9Y5G7 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.33■□□□□ 0.69
PCDHGA6Q9Y5G7 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHGA6Q9Y5G7 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHGA6Q9Y5G7 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.33■□□□□ 0.69
PCDHGA6Q9Y5G7 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHGA6Q9Y5G7 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHGA6Q9Y5G7 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
PCDHGA6Q9Y5G7 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHGA6Q9Y5G7 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHGA6Q9Y5G7 KRT17P3-201ENST00000420566 1262 ntBASIC19.33■□□□□ 0.68
PCDHGA6Q9Y5G7 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
PCDHGA6Q9Y5G7 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHGA6Q9Y5G7 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.33■□□□□ 0.68
PCDHGA6Q9Y5G7 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.33■□□□□ 0.68
PCDHGA6Q9Y5G7 AC105020.6-201ENST00000621523 1217 ntBASIC19.33■□□□□ 0.68
PCDHGA6Q9Y5G7 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDHGA6Q9Y5G7 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDHGA6Q9Y5G7 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHGA6Q9Y5G7 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDHGA6Q9Y5G7 AP005212.1-201ENST00000581547 1997 ntBASIC19.33■□□□□ 0.68
PCDHGA6Q9Y5G7 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDHGA6Q9Y5G7 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDHGA6Q9Y5G7 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.33■□□□□ 0.68
PCDHGA6Q9Y5G7 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
PCDHGA6Q9Y5G7 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.32■□□□□ 0.68
PCDHGA6Q9Y5G7 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA6Q9Y5G7 AC116050.2-201ENST00000612102 1779 ntBASIC19.32■□□□□ 0.68
PCDHGA6Q9Y5G7 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA6Q9Y5G7 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA6Q9Y5G7 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PCDHGA6Q9Y5G7 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA6Q9Y5G7 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
PCDHGA6Q9Y5G7 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA6Q9Y5G7 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA6Q9Y5G7 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA6Q9Y5G7 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHGA6Q9Y5G7 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA6Q9Y5G7 AL596275.1-201ENST00000423464 877 ntBASIC19.32■□□□□ 0.68
PCDHGA6Q9Y5G7 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA6Q9Y5G7 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.32■□□□□ 0.68
PCDHGA6Q9Y5G7 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.32■□□□□ 0.68
PCDHGA6Q9Y5G7 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHGA6Q9Y5G7 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
PCDHGA6Q9Y5G7 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.32■□□□□ 0.68
PCDHGA6Q9Y5G7 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.32■□□□□ 0.68
PCDHGA6Q9Y5G7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
PCDHGA6Q9Y5G7 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
PCDHGA6Q9Y5G7 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
PCDHGA6Q9Y5G7 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA6Q9Y5G7 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.32■□□□□ 0.68
PCDHGA6Q9Y5G7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PCDHGA6Q9Y5G7 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
PCDHGA6Q9Y5G7 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms