Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
PCDHB7Q9Y5E2 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB7Q9Y5E2 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
PCDHB7Q9Y5E2 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHB7Q9Y5E2 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.75■■□□□ 1.07
PCDHB7Q9Y5E2 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.75■■□□□ 1.07
PCDHB7Q9Y5E2 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHB7Q9Y5E2 AC004264.1-201ENST00000608354 794 ntBASIC21.75■■□□□ 1.07
PCDHB7Q9Y5E2 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHB7Q9Y5E2 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB7Q9Y5E2 AL024507.2-201ENST00000606070 2574 ntBASIC21.75■■□□□ 1.07
PCDHB7Q9Y5E2 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHB7Q9Y5E2 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB7Q9Y5E2 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB7Q9Y5E2 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB7Q9Y5E2 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB7Q9Y5E2 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB7Q9Y5E2 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB7Q9Y5E2 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PCDHB7Q9Y5E2 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
PCDHB7Q9Y5E2 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
PCDHB7Q9Y5E2 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB7Q9Y5E2 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB7Q9Y5E2 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB7Q9Y5E2 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB7Q9Y5E2 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDHB7Q9Y5E2 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB7Q9Y5E2 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.74■■□□□ 1.07
PCDHB7Q9Y5E2 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB7Q9Y5E2 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB7Q9Y5E2 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
PCDHB7Q9Y5E2 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB7Q9Y5E2 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB7Q9Y5E2 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB7Q9Y5E2 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB7Q9Y5E2 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.73■■□□□ 1.07
PCDHB7Q9Y5E2 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB7Q9Y5E2 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC21.73■■□□□ 1.07
PCDHB7Q9Y5E2 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
PCDHB7Q9Y5E2 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.73■■□□□ 1.07
PCDHB7Q9Y5E2 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.73■■□□□ 1.07
PCDHB7Q9Y5E2 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21.73■■□□□ 1.07
PCDHB7Q9Y5E2 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB7Q9Y5E2 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.73■■□□□ 1.07
PCDHB7Q9Y5E2 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB7Q9Y5E2 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB7Q9Y5E2 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB7Q9Y5E2 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
PCDHB7Q9Y5E2 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB7Q9Y5E2 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB7Q9Y5E2 FAM197Y1-201ENST00000421178 764 ntBASIC21.72■■□□□ 1.07
PCDHB7Q9Y5E2 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB7Q9Y5E2 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.72■■□□□ 1.07
PCDHB7Q9Y5E2 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB7Q9Y5E2 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.72■■□□□ 1.07
PCDHB7Q9Y5E2 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.72■■□□□ 1.07
PCDHB7Q9Y5E2 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
PCDHB7Q9Y5E2 AC010331.1-201ENST00000611423 582 ntBASIC21.72■■□□□ 1.07
PCDHB7Q9Y5E2 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.72■■□□□ 1.07
PCDHB7Q9Y5E2 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.72■■□□□ 1.07
PCDHB7Q9Y5E2 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB7Q9Y5E2 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
PCDHB7Q9Y5E2 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB7Q9Y5E2 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB7Q9Y5E2 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB7Q9Y5E2 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB7Q9Y5E2 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
PCDHB7Q9Y5E2 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB7Q9Y5E2 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
PCDHB7Q9Y5E2 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
PCDHB7Q9Y5E2 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
PCDHB7Q9Y5E2 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB7Q9Y5E2 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.71■■□□□ 1.07
PCDHB7Q9Y5E2 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
PCDHB7Q9Y5E2 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC21.71■■□□□ 1.07
PCDHB7Q9Y5E2 AC073195.1-201ENST00000607241 877 ntBASIC21.71■■□□□ 1.07
PCDHB7Q9Y5E2 AC097493.4-201ENST00000641197 219 ntBASIC21.71■■□□□ 1.07
PCDHB7Q9Y5E2 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB7Q9Y5E2 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB7Q9Y5E2 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB7Q9Y5E2 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB7Q9Y5E2 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB7Q9Y5E2 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB7Q9Y5E2 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.71■■□□□ 1.07
PCDHB7Q9Y5E2 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB7Q9Y5E2 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
PCDHB7Q9Y5E2 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
PCDHB7Q9Y5E2 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
PCDHB7Q9Y5E2 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
PCDHB7Q9Y5E2 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB7Q9Y5E2 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB7Q9Y5E2 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB7Q9Y5E2 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.7■■□□□ 1.06
PCDHB7Q9Y5E2 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDHB7Q9Y5E2 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB7Q9Y5E2 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.7■■□□□ 1.06
PCDHB7Q9Y5E2 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB7Q9Y5E2 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB7Q9Y5E2 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB7Q9Y5E2 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms