Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MRPS28Q9Y2Q9 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MRPS28Q9Y2Q9 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MRPS28Q9Y2Q9 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MRPS28Q9Y2Q9 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MRPS28Q9Y2Q9 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MRPS28Q9Y2Q9 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.29■□□□□ 0.36
MRPS28Q9Y2Q9 TMEM179-206ENST00000616017 1645 ntBASIC17.29■□□□□ 0.36
MRPS28Q9Y2Q9 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRPS28Q9Y2Q9 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRPS28Q9Y2Q9 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
MRPS28Q9Y2Q9 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.28■□□□□ 0.36
MRPS28Q9Y2Q9 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRPS28Q9Y2Q9 AC087289.5-201ENST00000586076 3175 ntBASIC17.28■□□□□ 0.36
MRPS28Q9Y2Q9 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRPS28Q9Y2Q9 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
MRPS28Q9Y2Q9 AL691432.2-201ENST00000607222 2038 ntBASIC17.28■□□□□ 0.36
MRPS28Q9Y2Q9 BX119927.1-201ENST00000636596 1552 ntBASIC17.28■□□□□ 0.36
MRPS28Q9Y2Q9 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRPS28Q9Y2Q9 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRPS28Q9Y2Q9 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.28■□□□□ 0.36
MRPS28Q9Y2Q9 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MRPS28Q9Y2Q9 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRPS28Q9Y2Q9 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
MRPS28Q9Y2Q9 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRPS28Q9Y2Q9 AC123595.1-201ENST00000440769 1046 ntBASIC17.28■□□□□ 0.36
MRPS28Q9Y2Q9 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.28■□□□□ 0.36
MRPS28Q9Y2Q9 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.28■□□□□ 0.36
MRPS28Q9Y2Q9 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.28■□□□□ 0.36
MRPS28Q9Y2Q9 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRPS28Q9Y2Q9 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRPS28Q9Y2Q9 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.28■□□□□ 0.36
MRPS28Q9Y2Q9 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
MRPS28Q9Y2Q9 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MRPS28Q9Y2Q9 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.27■□□□□ 0.36
MRPS28Q9Y2Q9 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
MRPS28Q9Y2Q9 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MRPS28Q9Y2Q9 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.27■□□□□ 0.36
MRPS28Q9Y2Q9 CDV3P1-201ENST00000471403 739 ntBASIC17.27■□□□□ 0.36
MRPS28Q9Y2Q9 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.27■□□□□ 0.36
MRPS28Q9Y2Q9 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.27■□□□□ 0.36
MRPS28Q9Y2Q9 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.27■□□□□ 0.36
MRPS28Q9Y2Q9 SLC7A5P1-201ENST00000568957 537 ntBASIC17.27■□□□□ 0.36
MRPS28Q9Y2Q9 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
MRPS28Q9Y2Q9 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
MRPS28Q9Y2Q9 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MRPS28Q9Y2Q9 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MRPS28Q9Y2Q9 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MRPS28Q9Y2Q9 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.27■□□□□ 0.35
MRPS28Q9Y2Q9 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
MRPS28Q9Y2Q9 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MRPS28Q9Y2Q9 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
MRPS28Q9Y2Q9 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MRPS28Q9Y2Q9 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MRPS28Q9Y2Q9 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
MRPS28Q9Y2Q9 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
MRPS28Q9Y2Q9 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MRPS28Q9Y2Q9 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
MRPS28Q9Y2Q9 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MRPS28Q9Y2Q9 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
MRPS28Q9Y2Q9 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.26■□□□□ 0.35
MRPS28Q9Y2Q9 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
MRPS28Q9Y2Q9 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.26■□□□□ 0.35
MRPS28Q9Y2Q9 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.26■□□□□ 0.35
MRPS28Q9Y2Q9 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MRPS28Q9Y2Q9 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MRPS28Q9Y2Q9 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
MRPS28Q9Y2Q9 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MRPS28Q9Y2Q9 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.26■□□□□ 0.35
MRPS28Q9Y2Q9 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.26■□□□□ 0.35
MRPS28Q9Y2Q9 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MRPS28Q9Y2Q9 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.26■□□□□ 0.35
MRPS28Q9Y2Q9 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.26■□□□□ 0.35
MRPS28Q9Y2Q9 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MRPS28Q9Y2Q9 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
MRPS28Q9Y2Q9 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
MRPS28Q9Y2Q9 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.26■□□□□ 0.35
MRPS28Q9Y2Q9 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MRPS28Q9Y2Q9 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MRPS28Q9Y2Q9 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MRPS28Q9Y2Q9 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
MRPS28Q9Y2Q9 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.25■□□□□ 0.35
MRPS28Q9Y2Q9 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MRPS28Q9Y2Q9 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MRPS28Q9Y2Q9 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.25■□□□□ 0.35
MRPS28Q9Y2Q9 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.25■□□□□ 0.35
MRPS28Q9Y2Q9 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MRPS28Q9Y2Q9 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.25■□□□□ 0.35
MRPS28Q9Y2Q9 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MRPS28Q9Y2Q9 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
MRPS28Q9Y2Q9 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
MRPS28Q9Y2Q9 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
MRPS28Q9Y2Q9 MIR638-201ENST00000385237 100 ntBASIC17.25■□□□□ 0.35
MRPS28Q9Y2Q9 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MRPS28Q9Y2Q9 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.25■□□□□ 0.35
MRPS28Q9Y2Q9 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.25■□□□□ 0.35
MRPS28Q9Y2Q9 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.25■□□□□ 0.35
MRPS28Q9Y2Q9 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.25■□□□□ 0.35
MRPS28Q9Y2Q9 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.25■□□□□ 0.35
MRPS28Q9Y2Q9 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 719.4 ms