Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 KRT8P17-201ENST00000453110 1448 ntBASIC21.3■■□□□ 1
CDH9Q9ULB4 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
CDH9Q9ULB4 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDH9Q9ULB4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
CDH9Q9ULB4 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.3■■□□□ 1
CDH9Q9ULB4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.3■■□□□ 1
CDH9Q9ULB4 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.3■■□□□ 1
CDH9Q9ULB4 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.3■■□□□ 1
CDH9Q9ULB4 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CDH9Q9ULB4 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CDH9Q9ULB4 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.3■■□□□ 1
CDH9Q9ULB4 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.3■■□□□ 1
CDH9Q9ULB4 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.3■■□□□ 1
CDH9Q9ULB4 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.3■■□□□ 1
CDH9Q9ULB4 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.3■■□□□ 1
CDH9Q9ULB4 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.3■■□□□ 1
CDH9Q9ULB4 RN7SL471P-201ENST00000580476 299 ntBASIC21.3■■□□□ 1
CDH9Q9ULB4 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.3■■□□□ 1
CDH9Q9ULB4 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDH9Q9ULB4 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.3■■□□□ 1
CDH9Q9ULB4 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
CDH9Q9ULB4 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDH9Q9ULB4 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.29■■□□□ 1
CDH9Q9ULB4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CDH9Q9ULB4 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.29■■□□□ 1
CDH9Q9ULB4 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDH9Q9ULB4 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CDH9Q9ULB4 GCSHP5-201ENST00000443090 522 ntBASIC21.29■■□□□ 1
CDH9Q9ULB4 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.29■■□□□ 1
CDH9Q9ULB4 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDH9Q9ULB4 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.29■■□□□ 1
CDH9Q9ULB4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.29■■□□□ 1
CDH9Q9ULB4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CDH9Q9ULB4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.29■■□□□ 1
CDH9Q9ULB4 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.29■■□□□ 1
CDH9Q9ULB4 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.29■■□□□ 1
CDH9Q9ULB4 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CDH9Q9ULB4 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDH9Q9ULB4 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CDH9Q9ULB4 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
CDH9Q9ULB4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
CDH9Q9ULB4 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CDH9Q9ULB4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.28■■□□□ 1
CDH9Q9ULB4 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.28■■□□□ 1
CDH9Q9ULB4 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDH9Q9ULB4 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.28■■□□□ 1
CDH9Q9ULB4 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.28■■□□□ 1
CDH9Q9ULB4 AC142381.4-202ENST00000563973 229 ntBASIC21.28■■□□□ 1
CDH9Q9ULB4 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.28■■□□□ 1
CDH9Q9ULB4 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.28■■□□□ 1
CDH9Q9ULB4 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.28■■□□□ 1
CDH9Q9ULB4 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDH9Q9ULB4 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CDH9Q9ULB4 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.28■■□□□ 1
CDH9Q9ULB4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDH9Q9ULB4 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
CDH9Q9ULB4 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CDH9Q9ULB4 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDH9Q9ULB4 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
CDH9Q9ULB4 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDH9Q9ULB4 RPS2P52-201ENST00000469610 820 ntBASIC21.27■■□□□ 1
CDH9Q9ULB4 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.27■■□□□ 1
CDH9Q9ULB4 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDH9Q9ULB4 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CDH9Q9ULB4 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.27■■□□□ 1
CDH9Q9ULB4 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
CDH9Q9ULB4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.27■■□□□ 1
CDH9Q9ULB4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.27■■□□□ 1
CDH9Q9ULB4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDH9Q9ULB4 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDH9Q9ULB4 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDH9Q9ULB4 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDH9Q9ULB4 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDH9Q9ULB4 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDH9Q9ULB4 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDH9Q9ULB4 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CDH9Q9ULB4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDH9Q9ULB4 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
CDH9Q9ULB4 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.26■□□□□ 0.99
CDH9Q9ULB4 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.26■□□□□ 0.99
CDH9Q9ULB4 MTDHP1-201ENST00000605323 784 ntBASIC21.26■□□□□ 0.99
CDH9Q9ULB4 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDH9Q9ULB4 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDH9Q9ULB4 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDH9Q9ULB4 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDH9Q9ULB4 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDH9Q9ULB4 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDH9Q9ULB4 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.25■□□□□ 0.99
CDH9Q9ULB4 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDH9Q9ULB4 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.25■□□□□ 0.99
CDH9Q9ULB4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDH9Q9ULB4 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDH9Q9ULB4 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.25■□□□□ 0.99
CDH9Q9ULB4 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.25■□□□□ 0.99
CDH9Q9ULB4 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDH9Q9ULB4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDH9Q9ULB4 C1QBPP2-201ENST00000528754 825 ntBASIC21.25■□□□□ 0.99
CDH9Q9ULB4 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.25■□□□□ 0.99
CDH9Q9ULB4 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.25■□□□□ 0.99
CDH9Q9ULB4 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms