Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MKS1Q9NXB0 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MKS1Q9NXB0 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MKS1Q9NXB0 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MKS1Q9NXB0 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.87■□□□□ 0.77
MKS1Q9NXB0 AL356652.1-201ENST00000615962 565 ntBASIC19.87■□□□□ 0.77
MKS1Q9NXB0 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
MKS1Q9NXB0 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MKS1Q9NXB0 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.87■□□□□ 0.77
MKS1Q9NXB0 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MKS1Q9NXB0 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
MKS1Q9NXB0 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MKS1Q9NXB0 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
MKS1Q9NXB0 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
MKS1Q9NXB0 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.86■□□□□ 0.77
MKS1Q9NXB0 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MKS1Q9NXB0 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.86■□□□□ 0.77
MKS1Q9NXB0 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MKS1Q9NXB0 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MKS1Q9NXB0 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.86■□□□□ 0.77
MKS1Q9NXB0 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MKS1Q9NXB0 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
MKS1Q9NXB0 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MKS1Q9NXB0 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.86■□□□□ 0.77
MKS1Q9NXB0 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.86■□□□□ 0.77
MKS1Q9NXB0 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.86■□□□□ 0.77
MKS1Q9NXB0 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.86■□□□□ 0.77
MKS1Q9NXB0 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.86■□□□□ 0.77
MKS1Q9NXB0 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.86■□□□□ 0.77
MKS1Q9NXB0 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
MKS1Q9NXB0 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
MKS1Q9NXB0 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MKS1Q9NXB0 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
MKS1Q9NXB0 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
MKS1Q9NXB0 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
MKS1Q9NXB0 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MKS1Q9NXB0 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
MKS1Q9NXB0 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
MKS1Q9NXB0 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.85■□□□□ 0.77
MKS1Q9NXB0 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
MKS1Q9NXB0 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MKS1Q9NXB0 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MKS1Q9NXB0 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MKS1Q9NXB0 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
MKS1Q9NXB0 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.85■□□□□ 0.77
MKS1Q9NXB0 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
MKS1Q9NXB0 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MKS1Q9NXB0 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.85■□□□□ 0.77
MKS1Q9NXB0 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.85■□□□□ 0.77
MKS1Q9NXB0 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.85■□□□□ 0.77
MKS1Q9NXB0 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.85■□□□□ 0.77
MKS1Q9NXB0 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
MKS1Q9NXB0 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
MKS1Q9NXB0 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
MKS1Q9NXB0 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MKS1Q9NXB0 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MKS1Q9NXB0 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.85■□□□□ 0.77
MKS1Q9NXB0 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.85■□□□□ 0.77
MKS1Q9NXB0 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MKS1Q9NXB0 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
MKS1Q9NXB0 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
MKS1Q9NXB0 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MKS1Q9NXB0 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
MKS1Q9NXB0 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
MKS1Q9NXB0 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MKS1Q9NXB0 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.84■□□□□ 0.77
MKS1Q9NXB0 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MKS1Q9NXB0 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
MKS1Q9NXB0 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.84■□□□□ 0.77
MKS1Q9NXB0 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
MKS1Q9NXB0 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.84■□□□□ 0.77
MKS1Q9NXB0 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MKS1Q9NXB0 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
MKS1Q9NXB0 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MKS1Q9NXB0 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MKS1Q9NXB0 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
MKS1Q9NXB0 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MKS1Q9NXB0 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MKS1Q9NXB0 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
MKS1Q9NXB0 PTBP1P-201ENST00000554374 1601 ntBASIC19.84■□□□□ 0.77
MKS1Q9NXB0 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
MKS1Q9NXB0 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
MKS1Q9NXB0 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MKS1Q9NXB0 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MKS1Q9NXB0 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
MKS1Q9NXB0 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MKS1Q9NXB0 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.83■□□□□ 0.77
MKS1Q9NXB0 TERF1P2-201ENST00000583350 1212 ntBASIC19.83■□□□□ 0.77
MKS1Q9NXB0 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.83■□□□□ 0.77
MKS1Q9NXB0 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MKS1Q9NXB0 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
MKS1Q9NXB0 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.83■□□□□ 0.76
MKS1Q9NXB0 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
MKS1Q9NXB0 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
MKS1Q9NXB0 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MKS1Q9NXB0 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MKS1Q9NXB0 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MKS1Q9NXB0 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
MKS1Q9NXB0 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.83■□□□□ 0.76
MKS1Q9NXB0 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms