Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC22.44■■□□□ 1.18
BLOC1S4Q9NUP1 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
BLOC1S4Q9NUP1 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
BLOC1S4Q9NUP1 PPP1R14BP2-201ENST00000426284 444 ntBASIC22.44■■□□□ 1.18
BLOC1S4Q9NUP1 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
BLOC1S4Q9NUP1 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
BLOC1S4Q9NUP1 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC22.44■■□□□ 1.18
BLOC1S4Q9NUP1 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC22.44■■□□□ 1.18
BLOC1S4Q9NUP1 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
BLOC1S4Q9NUP1 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC22.44■■□□□ 1.18
BLOC1S4Q9NUP1 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
BLOC1S4Q9NUP1 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
BLOC1S4Q9NUP1 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
BLOC1S4Q9NUP1 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
BLOC1S4Q9NUP1 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC22.43■■□□□ 1.18
BLOC1S4Q9NUP1 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
BLOC1S4Q9NUP1 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
BLOC1S4Q9NUP1 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
BLOC1S4Q9NUP1 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC22.43■■□□□ 1.18
BLOC1S4Q9NUP1 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC22.43■■□□□ 1.18
BLOC1S4Q9NUP1 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
BLOC1S4Q9NUP1 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
BLOC1S4Q9NUP1 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
BLOC1S4Q9NUP1 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
BLOC1S4Q9NUP1 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
BLOC1S4Q9NUP1 NME6-213ENST00000451657 871 ntTSL 2 BASIC22.43■■□□□ 1.18
BLOC1S4Q9NUP1 HES2-205ENST00000487437 968 ntTSL 3 BASIC22.43■■□□□ 1.18
BLOC1S4Q9NUP1 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
BLOC1S4Q9NUP1 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
BLOC1S4Q9NUP1 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC22.43■■□□□ 1.18
BLOC1S4Q9NUP1 MYC-209ENST00000641252 345 ntBASIC22.43■■□□□ 1.18
BLOC1S4Q9NUP1 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
BLOC1S4Q9NUP1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC22.43■■□□□ 1.18
BLOC1S4Q9NUP1 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
BLOC1S4Q9NUP1 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
BLOC1S4Q9NUP1 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
BLOC1S4Q9NUP1 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC22.42■■□□□ 1.18
BLOC1S4Q9NUP1 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
BLOC1S4Q9NUP1 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
BLOC1S4Q9NUP1 AL691432.2-201ENST00000607222 2038 ntBASIC22.42■■□□□ 1.18
BLOC1S4Q9NUP1 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
BLOC1S4Q9NUP1 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
BLOC1S4Q9NUP1 SERP1-205ENST00000487153 657 ntTSL 4 BASIC22.42■■□□□ 1.18
BLOC1S4Q9NUP1 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
BLOC1S4Q9NUP1 AC142086.2-201ENST00000569753 217 ntBASIC22.42■■□□□ 1.18
BLOC1S4Q9NUP1 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC22.42■■□□□ 1.18
BLOC1S4Q9NUP1 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
BLOC1S4Q9NUP1 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
BLOC1S4Q9NUP1 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC22.42■■□□□ 1.18
BLOC1S4Q9NUP1 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
BLOC1S4Q9NUP1 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
BLOC1S4Q9NUP1 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
BLOC1S4Q9NUP1 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
BLOC1S4Q9NUP1 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
BLOC1S4Q9NUP1 KRT8P17-201ENST00000453110 1448 ntBASIC22.41■■□□□ 1.18
BLOC1S4Q9NUP1 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC22.41■■□□□ 1.18
BLOC1S4Q9NUP1 SLC25A24-204ENST00000569674 2357 ntBASIC22.41■■□□□ 1.18
BLOC1S4Q9NUP1 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
BLOC1S4Q9NUP1 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
BLOC1S4Q9NUP1 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
BLOC1S4Q9NUP1 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
BLOC1S4Q9NUP1 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
BLOC1S4Q9NUP1 SERPINH1P1-201ENST00000419794 1249 ntBASIC22.41■■□□□ 1.18
BLOC1S4Q9NUP1 HLA-L-209ENST00000420110 1011 ntBASIC22.41■■□□□ 1.18
BLOC1S4Q9NUP1 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC22.41■■□□□ 1.18
BLOC1S4Q9NUP1 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC22.41■■□□□ 1.18
BLOC1S4Q9NUP1 BET1L-207ENST00000529614 560 ntTSL 5 BASIC22.41■■□□□ 1.18
BLOC1S4Q9NUP1 PFKL-212ENST00000628044 129 ntTSL 3 BASIC22.41■■□□□ 1.18
BLOC1S4Q9NUP1 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
BLOC1S4Q9NUP1 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
BLOC1S4Q9NUP1 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
BLOC1S4Q9NUP1 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
BLOC1S4Q9NUP1 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
BLOC1S4Q9NUP1 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
BLOC1S4Q9NUP1 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
BLOC1S4Q9NUP1 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
BLOC1S4Q9NUP1 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
BLOC1S4Q9NUP1 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
BLOC1S4Q9NUP1 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC22.4■■□□□ 1.18
BLOC1S4Q9NUP1 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
BLOC1S4Q9NUP1 MIR4758-201ENST00000577688 71 ntBASIC22.4■■□□□ 1.18
BLOC1S4Q9NUP1 AL031963.3-201ENST00000606441 850 ntBASIC22.4■■□□□ 1.18
BLOC1S4Q9NUP1 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC22.4■■□□□ 1.18
BLOC1S4Q9NUP1 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
BLOC1S4Q9NUP1 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
BLOC1S4Q9NUP1 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
BLOC1S4Q9NUP1 MOK-233ENST00000524214 1539 ntTSL 2 BASIC22.4■■□□□ 1.18
BLOC1S4Q9NUP1 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
BLOC1S4Q9NUP1 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
BLOC1S4Q9NUP1 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
BLOC1S4Q9NUP1 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
BLOC1S4Q9NUP1 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC22.39■■□□□ 1.18
BLOC1S4Q9NUP1 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
BLOC1S4Q9NUP1 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC22.39■■□□□ 1.18
BLOC1S4Q9NUP1 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC22.39■■□□□ 1.18
BLOC1S4Q9NUP1 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
BLOC1S4Q9NUP1 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
BLOC1S4Q9NUP1 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
BLOC1S4Q9NUP1 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC22.39■■□□□ 1.17
BLOC1S4Q9NUP1 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms