Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.15■□□□□ 0.98
ATXN3LQ9H3M9 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.15■□□□□ 0.98
ATXN3LQ9H3M9 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.15■□□□□ 0.98
ATXN3LQ9H3M9 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ATXN3LQ9H3M9 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.15■□□□□ 0.98
ATXN3LQ9H3M9 MIR4497-201ENST00000583208 89 ntBASIC21.15■□□□□ 0.98
ATXN3LQ9H3M9 AC124016.1-201ENST00000609552 612 ntBASIC21.15■□□□□ 0.98
ATXN3LQ9H3M9 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.15■□□□□ 0.98
ATXN3LQ9H3M9 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.15■□□□□ 0.98
ATXN3LQ9H3M9 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATXN3LQ9H3M9 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.15■□□□□ 0.98
ATXN3LQ9H3M9 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATXN3LQ9H3M9 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATXN3LQ9H3M9 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATXN3LQ9H3M9 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.15■□□□□ 0.98
ATXN3LQ9H3M9 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATXN3LQ9H3M9 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATXN3LQ9H3M9 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
ATXN3LQ9H3M9 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ATXN3LQ9H3M9 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ATXN3LQ9H3M9 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
ATXN3LQ9H3M9 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.14■□□□□ 0.98
ATXN3LQ9H3M9 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.14■□□□□ 0.98
ATXN3LQ9H3M9 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ATXN3LQ9H3M9 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.14■□□□□ 0.97
ATXN3LQ9H3M9 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATXN3LQ9H3M9 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.14■□□□□ 0.97
ATXN3LQ9H3M9 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.14■□□□□ 0.97
ATXN3LQ9H3M9 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.14■□□□□ 0.97
ATXN3LQ9H3M9 MIR2861-201ENST00000636310 90 ntBASIC21.14■□□□□ 0.97
ATXN3LQ9H3M9 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.14■□□□□ 0.97
ATXN3LQ9H3M9 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATXN3LQ9H3M9 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ATXN3LQ9H3M9 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ATXN3LQ9H3M9 AC121338.2-201ENST00000622535 1744 ntBASIC21.13■□□□□ 0.97
ATXN3LQ9H3M9 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATXN3LQ9H3M9 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATXN3LQ9H3M9 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
ATXN3LQ9H3M9 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
ATXN3LQ9H3M9 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.13■□□□□ 0.97
ATXN3LQ9H3M9 SNORA78-201ENST00000459373 127 ntBASIC21.13■□□□□ 0.97
ATXN3LQ9H3M9 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.13■□□□□ 0.97
ATXN3LQ9H3M9 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.13■□□□□ 0.97
ATXN3LQ9H3M9 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.13■□□□□ 0.97
ATXN3LQ9H3M9 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.13■□□□□ 0.97
ATXN3LQ9H3M9 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.13■□□□□ 0.97
ATXN3LQ9H3M9 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.13■□□□□ 0.97
ATXN3LQ9H3M9 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.13■□□□□ 0.97
ATXN3LQ9H3M9 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.13■□□□□ 0.97
ATXN3LQ9H3M9 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATXN3LQ9H3M9 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.13■□□□□ 0.97
ATXN3LQ9H3M9 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.13■□□□□ 0.97
ATXN3LQ9H3M9 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
ATXN3LQ9H3M9 KRT8P36-201ENST00000489121 1440 ntBASIC21.12■□□□□ 0.97
ATXN3LQ9H3M9 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.12■□□□□ 0.97
ATXN3LQ9H3M9 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATXN3LQ9H3M9 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATXN3LQ9H3M9 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.12■□□□□ 0.97
ATXN3LQ9H3M9 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATXN3LQ9H3M9 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
ATXN3LQ9H3M9 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATXN3LQ9H3M9 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATXN3LQ9H3M9 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ATXN3LQ9H3M9 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATXN3LQ9H3M9 KRASP1-201ENST00000407852 552 ntBASIC21.12■□□□□ 0.97
ATXN3LQ9H3M9 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATXN3LQ9H3M9 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
ATXN3LQ9H3M9 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.12■□□□□ 0.97
ATXN3LQ9H3M9 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATXN3LQ9H3M9 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC21.12■□□□□ 0.97
ATXN3LQ9H3M9 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ATXN3LQ9H3M9 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATXN3LQ9H3M9 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
ATXN3LQ9H3M9 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.12■□□□□ 0.97
ATXN3LQ9H3M9 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ATXN3LQ9H3M9 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
ATXN3LQ9H3M9 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATXN3LQ9H3M9 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATXN3LQ9H3M9 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATXN3LQ9H3M9 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
ATXN3LQ9H3M9 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATXN3LQ9H3M9 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATXN3LQ9H3M9 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATXN3LQ9H3M9 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATXN3LQ9H3M9 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATXN3LQ9H3M9 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATXN3LQ9H3M9 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATXN3LQ9H3M9 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
ATXN3LQ9H3M9 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATXN3LQ9H3M9 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.11■□□□□ 0.97
ATXN3LQ9H3M9 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATXN3LQ9H3M9 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATXN3LQ9H3M9 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATXN3LQ9H3M9 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.11■□□□□ 0.97
ATXN3LQ9H3M9 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATXN3LQ9H3M9 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATXN3LQ9H3M9 AC133681.1-201ENST00000465482 601 ntBASIC21.11■□□□□ 0.97
ATXN3LQ9H3M9 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.11■□□□□ 0.97
ATXN3LQ9H3M9 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.11■□□□□ 0.97
ATXN3LQ9H3M9 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms