Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CDT1Q9H211 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.84■■□□□ 1.09
CDT1Q9H211 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CDT1Q9H211 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.84■■□□□ 1.09
CDT1Q9H211 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
CDT1Q9H211 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.84■■□□□ 1.09
CDT1Q9H211 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDT1Q9H211 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDT1Q9H211 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDT1Q9H211 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CDT1Q9H211 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDT1Q9H211 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.83■■□□□ 1.09
CDT1Q9H211 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
CDT1Q9H211 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
CDT1Q9H211 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDT1Q9H211 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.83■■□□□ 1.09
CDT1Q9H211 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.83■■□□□ 1.09
CDT1Q9H211 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
CDT1Q9H211 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.83■■□□□ 1.09
CDT1Q9H211 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.83■■□□□ 1.09
CDT1Q9H211 RN7SL471P-201ENST00000580476 299 ntBASIC21.83■■□□□ 1.09
CDT1Q9H211 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.83■■□□□ 1.09
CDT1Q9H211 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDT1Q9H211 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CDT1Q9H211 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CDT1Q9H211 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CDT1Q9H211 AC124283.5-201ENST00000624661 1809 ntBASIC21.83■■□□□ 1.08
CDT1Q9H211 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDT1Q9H211 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CDT1Q9H211 KRT8P17-201ENST00000453110 1448 ntBASIC21.82■■□□□ 1.08
CDT1Q9H211 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDT1Q9H211 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDT1Q9H211 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDT1Q9H211 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDT1Q9H211 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CDT1Q9H211 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDT1Q9H211 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDT1Q9H211 HLA-G-202ENST00000376815 851 ntBASIC21.82■■□□□ 1.08
CDT1Q9H211 HLA-G-203ENST00000376818 1127 ntBASIC21.82■■□□□ 1.08
CDT1Q9H211 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDT1Q9H211 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
CDT1Q9H211 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.82■■□□□ 1.08
CDT1Q9H211 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDT1Q9H211 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDT1Q9H211 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.82■■□□□ 1.08
CDT1Q9H211 AC073314.1-201ENST00000568729 2216 ntBASIC21.82■■□□□ 1.08
CDT1Q9H211 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.81■■□□□ 1.08
CDT1Q9H211 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDT1Q9H211 SMG8-203ENST00000578922 2178 ntBASIC21.81■■□□□ 1.08
CDT1Q9H211 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CDT1Q9H211 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.81■■□□□ 1.08
CDT1Q9H211 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CDT1Q9H211 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDT1Q9H211 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.81■■□□□ 1.08
CDT1Q9H211 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.81■■□□□ 1.08
CDT1Q9H211 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDT1Q9H211 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.81■■□□□ 1.08
CDT1Q9H211 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.81■■□□□ 1.08
CDT1Q9H211 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
CDT1Q9H211 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.81■■□□□ 1.08
CDT1Q9H211 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.81■■□□□ 1.08
CDT1Q9H211 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
CDT1Q9H211 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDT1Q9H211 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDT1Q9H211 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDT1Q9H211 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
CDT1Q9H211 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CDT1Q9H211 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
CDT1Q9H211 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDT1Q9H211 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.8■■□□□ 1.08
CDT1Q9H211 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.8■■□□□ 1.08
CDT1Q9H211 AL158047.1-201ENST00000445918 881 ntBASIC21.8■■□□□ 1.08
CDT1Q9H211 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.8■■□□□ 1.08
CDT1Q9H211 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.8■■□□□ 1.08
CDT1Q9H211 AC142381.4-202ENST00000563973 229 ntBASIC21.8■■□□□ 1.08
CDT1Q9H211 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDT1Q9H211 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.8■■□□□ 1.08
CDT1Q9H211 MTDHP1-201ENST00000605323 784 ntBASIC21.8■■□□□ 1.08
CDT1Q9H211 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDT1Q9H211 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.8■■□□□ 1.08
CDT1Q9H211 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDT1Q9H211 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDT1Q9H211 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.79■■□□□ 1.08
CDT1Q9H211 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDT1Q9H211 AC020907.5-201ENST00000624372 1936 ntBASIC21.79■■□□□ 1.08
CDT1Q9H211 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDT1Q9H211 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CDT1Q9H211 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.79■■□□□ 1.08
CDT1Q9H211 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.79■■□□□ 1.08
CDT1Q9H211 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
CDT1Q9H211 AL359736.2-201ENST00000621992 437 ntBASIC21.79■■□□□ 1.08
CDT1Q9H211 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDT1Q9H211 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CDT1Q9H211 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CDT1Q9H211 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDT1Q9H211 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDT1Q9H211 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDT1Q9H211 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDT1Q9H211 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
CDT1Q9H211 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms