Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.74■□□□□ 0.43
COMMD4Q9H0A8 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COMMD4Q9H0A8 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.74■□□□□ 0.43
COMMD4Q9H0A8 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COMMD4Q9H0A8 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COMMD4Q9H0A8 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COMMD4Q9H0A8 DPP3P2-201ENST00000416030 1696 ntBASIC17.74■□□□□ 0.43
COMMD4Q9H0A8 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
COMMD4Q9H0A8 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COMMD4Q9H0A8 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.73■□□□□ 0.43
COMMD4Q9H0A8 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.73■□□□□ 0.43
COMMD4Q9H0A8 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.73■□□□□ 0.43
COMMD4Q9H0A8 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
COMMD4Q9H0A8 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COMMD4Q9H0A8 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
COMMD4Q9H0A8 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COMMD4Q9H0A8 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COMMD4Q9H0A8 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
COMMD4Q9H0A8 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COMMD4Q9H0A8 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
COMMD4Q9H0A8 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
COMMD4Q9H0A8 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
COMMD4Q9H0A8 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COMMD4Q9H0A8 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COMMD4Q9H0A8 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
COMMD4Q9H0A8 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COMMD4Q9H0A8 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
COMMD4Q9H0A8 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
COMMD4Q9H0A8 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.72■□□□□ 0.43
COMMD4Q9H0A8 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COMMD4Q9H0A8 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COMMD4Q9H0A8 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
COMMD4Q9H0A8 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COMMD4Q9H0A8 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.72■□□□□ 0.43
COMMD4Q9H0A8 FAM21FP-204ENST00000608637 956 ntBASIC17.72■□□□□ 0.43
COMMD4Q9H0A8 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COMMD4Q9H0A8 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COMMD4Q9H0A8 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COMMD4Q9H0A8 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COMMD4Q9H0A8 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
COMMD4Q9H0A8 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.72■□□□□ 0.43
COMMD4Q9H0A8 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COMMD4Q9H0A8 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COMMD4Q9H0A8 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
COMMD4Q9H0A8 AC116562.4-201ENST00000641316 2276 ntBASIC17.72■□□□□ 0.43
COMMD4Q9H0A8 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.71■□□□□ 0.43
COMMD4Q9H0A8 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COMMD4Q9H0A8 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
COMMD4Q9H0A8 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.71■□□□□ 0.43
COMMD4Q9H0A8 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
COMMD4Q9H0A8 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
COMMD4Q9H0A8 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.71■□□□□ 0.43
COMMD4Q9H0A8 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COMMD4Q9H0A8 IRS3P-201ENST00000223076 1006 ntBASIC17.71■□□□□ 0.43
COMMD4Q9H0A8 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.71■□□□□ 0.43
COMMD4Q9H0A8 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.71■□□□□ 0.43
COMMD4Q9H0A8 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
COMMD4Q9H0A8 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.71■□□□□ 0.43
COMMD4Q9H0A8 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.71■□□□□ 0.43
COMMD4Q9H0A8 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.71■□□□□ 0.43
COMMD4Q9H0A8 KRT8P36-201ENST00000489121 1440 ntBASIC17.71■□□□□ 0.43
COMMD4Q9H0A8 AC090340.1-201ENST00000620778 4980 ntBASIC17.71■□□□□ 0.43
COMMD4Q9H0A8 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.71■□□□□ 0.43
COMMD4Q9H0A8 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
COMMD4Q9H0A8 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
COMMD4Q9H0A8 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COMMD4Q9H0A8 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.7■□□□□ 0.42
COMMD4Q9H0A8 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.7■□□□□ 0.42
COMMD4Q9H0A8 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.7■□□□□ 0.42
COMMD4Q9H0A8 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.7■□□□□ 0.42
COMMD4Q9H0A8 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
COMMD4Q9H0A8 AC087289.5-201ENST00000586076 3175 ntBASIC17.7■□□□□ 0.42
COMMD4Q9H0A8 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COMMD4Q9H0A8 TMEM179-206ENST00000616017 1645 ntBASIC17.7■□□□□ 0.42
COMMD4Q9H0A8 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COMMD4Q9H0A8 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COMMD4Q9H0A8 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
COMMD4Q9H0A8 AC007322.3-201ENST00000426526 701 ntBASIC17.7■□□□□ 0.42
COMMD4Q9H0A8 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
COMMD4Q9H0A8 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.7■□□□□ 0.42
COMMD4Q9H0A8 CCDC92B-201ENST00000575506 885 ntBASIC17.7■□□□□ 0.42
COMMD4Q9H0A8 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COMMD4Q9H0A8 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COMMD4Q9H0A8 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
COMMD4Q9H0A8 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.7■□□□□ 0.42
COMMD4Q9H0A8 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
COMMD4Q9H0A8 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
COMMD4Q9H0A8 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COMMD4Q9H0A8 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.7■□□□□ 0.42
COMMD4Q9H0A8 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
COMMD4Q9H0A8 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
COMMD4Q9H0A8 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COMMD4Q9H0A8 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
COMMD4Q9H0A8 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
COMMD4Q9H0A8 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COMMD4Q9H0A8 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.69■□□□□ 0.42
COMMD4Q9H0A8 SLC7A5P2-201ENST00000553010 536 ntBASIC17.69■□□□□ 0.42
COMMD4Q9H0A8 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.69■□□□□ 0.42
COMMD4Q9H0A8 AC005837.3-201ENST00000612163 286 ntBASIC17.69■□□□□ 0.42
COMMD4Q9H0A8 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms