Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC24.61■■□□□ 1.53
RTFDC1Q9BY42 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RTFDC1Q9BY42 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
RTFDC1Q9BY42 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
RTFDC1Q9BY42 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RTFDC1Q9BY42 AP002982.1-201ENST00000492365 877 ntBASIC24.6■■□□□ 1.53
RTFDC1Q9BY42 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC24.6■■□□□ 1.53
RTFDC1Q9BY42 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC24.6■■□□□ 1.53
RTFDC1Q9BY42 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC24.6■■□□□ 1.53
RTFDC1Q9BY42 AL031963.3-201ENST00000606441 850 ntBASIC24.6■■□□□ 1.53
RTFDC1Q9BY42 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC24.6■■□□□ 1.53
RTFDC1Q9BY42 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC24.6■■□□□ 1.53
RTFDC1Q9BY42 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
RTFDC1Q9BY42 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
RTFDC1Q9BY42 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
RTFDC1Q9BY42 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RTFDC1Q9BY42 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RTFDC1Q9BY42 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC24.6■■□□□ 1.53
RTFDC1Q9BY42 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC24.59■■□□□ 1.53
RTFDC1Q9BY42 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
RTFDC1Q9BY42 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC24.59■■□□□ 1.53
RTFDC1Q9BY42 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC24.59■■□□□ 1.53
RTFDC1Q9BY42 AC113347.1-201ENST00000413321 391 ntBASIC24.59■■□□□ 1.53
RTFDC1Q9BY42 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC24.59■■□□□ 1.53
RTFDC1Q9BY42 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RTFDC1Q9BY42 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC24.59■■□□□ 1.53
RTFDC1Q9BY42 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC24.59■■□□□ 1.53
RTFDC1Q9BY42 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC24.59■■□□□ 1.53
RTFDC1Q9BY42 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RTFDC1Q9BY42 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RTFDC1Q9BY42 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC24.59■■□□□ 1.53
RTFDC1Q9BY42 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC24.59■■□□□ 1.53
RTFDC1Q9BY42 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
RTFDC1Q9BY42 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
RTFDC1Q9BY42 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC24.58■■□□□ 1.53
RTFDC1Q9BY42 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC24.58■■□□□ 1.53
RTFDC1Q9BY42 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
RTFDC1Q9BY42 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
RTFDC1Q9BY42 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
RTFDC1Q9BY42 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC24.58■■□□□ 1.53
RTFDC1Q9BY42 MIR1238-201ENST00000408483 83 ntBASIC24.58■■□□□ 1.53
RTFDC1Q9BY42 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC24.58■■□□□ 1.53
RTFDC1Q9BY42 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC24.58■■□□□ 1.53
RTFDC1Q9BY42 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC24.58■■□□□ 1.53
RTFDC1Q9BY42 FITM1-202ENST00000559294 800 ntBASIC24.58■■□□□ 1.53
RTFDC1Q9BY42 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
RTFDC1Q9BY42 AC073508.3-201ENST00000619697 1419 ntBASIC24.58■■□□□ 1.53
RTFDC1Q9BY42 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC24.58■■□□□ 1.52
RTFDC1Q9BY42 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
RTFDC1Q9BY42 Z98882.1-201ENST00000622160 2253 ntBASIC24.58■■□□□ 1.52
RTFDC1Q9BY42 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
RTFDC1Q9BY42 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
RTFDC1Q9BY42 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RTFDC1Q9BY42 FBXW4P1-201ENST00000426721 2239 ntBASIC24.57■■□□□ 1.52
RTFDC1Q9BY42 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RTFDC1Q9BY42 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RTFDC1Q9BY42 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC24.57■■□□□ 1.52
RTFDC1Q9BY42 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC24.57■■□□□ 1.52
RTFDC1Q9BY42 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RTFDC1Q9BY42 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC24.57■■□□□ 1.52
RTFDC1Q9BY42 DUT-205ENST00000558813 769 ntTSL 2 BASIC24.57■■□□□ 1.52
RTFDC1Q9BY42 TPM1-226ENST00000560959 925 ntTSL 2 BASIC24.57■■□□□ 1.52
RTFDC1Q9BY42 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC24.57■■□□□ 1.52
RTFDC1Q9BY42 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
RTFDC1Q9BY42 CYP2D8P-201ENST00000433633 1490 ntBASIC24.57■■□□□ 1.52
RTFDC1Q9BY42 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
RTFDC1Q9BY42 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
RTFDC1Q9BY42 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC24.56■■□□□ 1.52
RTFDC1Q9BY42 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC24.56■■□□□ 1.52
RTFDC1Q9BY42 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
RTFDC1Q9BY42 LINC01568-207ENST00000641790 1380 ntBASIC24.56■■□□□ 1.52
RTFDC1Q9BY42 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
RTFDC1Q9BY42 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
RTFDC1Q9BY42 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
RTFDC1Q9BY42 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RTFDC1Q9BY42 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
RTFDC1Q9BY42 KSR1P1-201ENST00000446298 240 ntBASIC24.56■■□□□ 1.52
RTFDC1Q9BY42 AC010947.1-201ENST00000623454 693 ntBASIC24.56■■□□□ 1.52
RTFDC1Q9BY42 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RTFDC1Q9BY42 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RTFDC1Q9BY42 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
RTFDC1Q9BY42 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
RTFDC1Q9BY42 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RTFDC1Q9BY42 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RTFDC1Q9BY42 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RTFDC1Q9BY42 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
RTFDC1Q9BY42 PTBP1P-201ENST00000554374 1601 ntBASIC24.55■■□□□ 1.52
RTFDC1Q9BY42 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC24.55■■□□□ 1.52
RTFDC1Q9BY42 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RTFDC1Q9BY42 NIFKP9-201ENST00000419265 221 ntBASIC24.55■■□□□ 1.52
RTFDC1Q9BY42 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC24.55■■□□□ 1.52
RTFDC1Q9BY42 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC24.55■■□□□ 1.52
RTFDC1Q9BY42 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC24.55■■□□□ 1.52
RTFDC1Q9BY42 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC24.55■■□□□ 1.52
RTFDC1Q9BY42 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC24.55■■□□□ 1.52
RTFDC1Q9BY42 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RTFDC1Q9BY42 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
RTFDC1Q9BY42 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
RTFDC1Q9BY42 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
RTFDC1Q9BY42 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC24.54■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms