Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPAS2Q99743 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPAS2Q99743 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPAS2Q99743 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPAS2Q99743 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.64■□□□□ 0.73
NPAS2Q99743 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NPAS2Q99743 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPAS2Q99743 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPAS2Q99743 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPAS2Q99743 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.64■□□□□ 0.73
NPAS2Q99743 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.64■□□□□ 0.73
NPAS2Q99743 AC125437.2-201ENST00000625180 2167 ntBASIC19.64■□□□□ 0.73
NPAS2Q99743 AL158211.5-201ENST00000623583 2518 ntBASIC19.64■□□□□ 0.73
NPAS2Q99743 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPAS2Q99743 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPAS2Q99743 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NPAS2Q99743 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.63■□□□□ 0.73
NPAS2Q99743 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NPAS2Q99743 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NPAS2Q99743 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NPAS2Q99743 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NPAS2Q99743 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.63■□□□□ 0.73
NPAS2Q99743 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NPAS2Q99743 MYCNOS-205ENST00000641950 531 ntBASIC19.63■□□□□ 0.73
NPAS2Q99743 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NPAS2Q99743 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.63■□□□□ 0.73
NPAS2Q99743 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NPAS2Q99743 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NPAS2Q99743 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.63■□□□□ 0.73
NPAS2Q99743 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NPAS2Q99743 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
NPAS2Q99743 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NPAS2Q99743 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NPAS2Q99743 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
NPAS2Q99743 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NPAS2Q99743 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
NPAS2Q99743 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.62■□□□□ 0.73
NPAS2Q99743 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
NPAS2Q99743 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
NPAS2Q99743 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NPAS2Q99743 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NPAS2Q99743 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.62■□□□□ 0.73
NPAS2Q99743 HLA-L-209ENST00000420110 1011 ntBASIC19.62■□□□□ 0.73
NPAS2Q99743 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.62■□□□□ 0.73
NPAS2Q99743 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.62■□□□□ 0.73
NPAS2Q99743 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
NPAS2Q99743 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.62■□□□□ 0.73
NPAS2Q99743 DUX4L16-201ENST00000555130 1264 ntBASIC19.62■□□□□ 0.73
NPAS2Q99743 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.62■□□□□ 0.73
NPAS2Q99743 AC053503.5-201ENST00000601508 636 ntBASIC19.62■□□□□ 0.73
NPAS2Q99743 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.62■□□□□ 0.73
NPAS2Q99743 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.62■□□□□ 0.73
NPAS2Q99743 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NPAS2Q99743 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
NPAS2Q99743 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NPAS2Q99743 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NPAS2Q99743 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NPAS2Q99743 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NPAS2Q99743 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NPAS2Q99743 AC061975.6-201ENST00000579045 1553 ntBASIC19.61■□□□□ 0.73
NPAS2Q99743 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NPAS2Q99743 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
NPAS2Q99743 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NPAS2Q99743 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NPAS2Q99743 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.61■□□□□ 0.73
NPAS2Q99743 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NPAS2Q99743 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NPAS2Q99743 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NPAS2Q99743 AC098818.2-201ENST00000564925 2320 ntBASIC19.61■□□□□ 0.73
NPAS2Q99743 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
NPAS2Q99743 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
NPAS2Q99743 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NPAS2Q99743 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.61■□□□□ 0.73
NPAS2Q99743 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NPAS2Q99743 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.61■□□□□ 0.73
NPAS2Q99743 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NPAS2Q99743 AC018445.3-201ENST00000624177 1945 ntBASIC19.61■□□□□ 0.73
NPAS2Q99743 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NPAS2Q99743 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NPAS2Q99743 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NPAS2Q99743 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NPAS2Q99743 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NPAS2Q99743 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.6■□□□□ 0.73
NPAS2Q99743 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NPAS2Q99743 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
NPAS2Q99743 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.6■□□□□ 0.73
NPAS2Q99743 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.6■□□□□ 0.73
NPAS2Q99743 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.6■□□□□ 0.73
NPAS2Q99743 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
NPAS2Q99743 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.6■□□□□ 0.73
NPAS2Q99743 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.6■□□□□ 0.73
NPAS2Q99743 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NPAS2Q99743 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NPAS2Q99743 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.6■□□□□ 0.73
NPAS2Q99743 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
NPAS2Q99743 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NPAS2Q99743 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NPAS2Q99743 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NPAS2Q99743 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NPAS2Q99743 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms