Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
NPAS1Q99742 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPAS1Q99742 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.32■□□□□ 0.52
NPAS1Q99742 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPAS1Q99742 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
NPAS1Q99742 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPAS1Q99742 AC073210.2-201ENST00000430369 194 ntBASIC18.32■□□□□ 0.52
NPAS1Q99742 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.32■□□□□ 0.52
NPAS1Q99742 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.32■□□□□ 0.52
NPAS1Q99742 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NPAS1Q99742 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NPAS1Q99742 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.32■□□□□ 0.52
NPAS1Q99742 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.32■□□□□ 0.52
NPAS1Q99742 AC133041.1-202ENST00000642053 222 ntBASIC18.32■□□□□ 0.52
NPAS1Q99742 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.32■□□□□ 0.52
NPAS1Q99742 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPAS1Q99742 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.31■□□□□ 0.52
NPAS1Q99742 DPP3P2-201ENST00000416030 1696 ntBASIC18.31■□□□□ 0.52
NPAS1Q99742 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS1Q99742 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS1Q99742 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS1Q99742 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.31■□□□□ 0.52
NPAS1Q99742 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS1Q99742 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS1Q99742 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.31■□□□□ 0.52
NPAS1Q99742 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS1Q99742 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.31■□□□□ 0.52
NPAS1Q99742 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS1Q99742 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
NPAS1Q99742 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS1Q99742 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS1Q99742 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS1Q99742 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS1Q99742 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.31■□□□□ 0.52
NPAS1Q99742 GABARAPL3-202ENST00000624044 1851 ntBASIC18.31■□□□□ 0.52
NPAS1Q99742 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS1Q99742 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.3■□□□□ 0.52
NPAS1Q99742 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.3■□□□□ 0.52
NPAS1Q99742 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS1Q99742 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS1Q99742 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS1Q99742 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS1Q99742 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS1Q99742 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS1Q99742 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS1Q99742 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
NPAS1Q99742 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.3■□□□□ 0.52
NPAS1Q99742 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
NPAS1Q99742 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS1Q99742 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS1Q99742 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.3■□□□□ 0.52
NPAS1Q99742 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
NPAS1Q99742 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS1Q99742 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
NPAS1Q99742 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
NPAS1Q99742 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS1Q99742 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS1Q99742 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS1Q99742 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS1Q99742 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS1Q99742 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NPAS1Q99742 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPAS1Q99742 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPAS1Q99742 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPAS1Q99742 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPAS1Q99742 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.29■□□□□ 0.52
NPAS1Q99742 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.29■□□□□ 0.52
NPAS1Q99742 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPAS1Q99742 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPAS1Q99742 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
NPAS1Q99742 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.29■□□□□ 0.52
NPAS1Q99742 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPAS1Q99742 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPAS1Q99742 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPAS1Q99742 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
NPAS1Q99742 AC097658.1-201ENST00000475555 843 ntBASIC18.29■□□□□ 0.52
NPAS1Q99742 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.29■□□□□ 0.52
NPAS1Q99742 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.29■□□□□ 0.52
NPAS1Q99742 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.29■□□□□ 0.52
NPAS1Q99742 PTBP1P-201ENST00000554374 1601 ntBASIC18.29■□□□□ 0.52
NPAS1Q99742 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPAS1Q99742 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPAS1Q99742 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.29■□□□□ 0.52
NPAS1Q99742 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.29■□□□□ 0.52
NPAS1Q99742 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.29■□□□□ 0.52
NPAS1Q99742 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPAS1Q99742 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NPAS1Q99742 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPAS1Q99742 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.29■□□□□ 0.52
NPAS1Q99742 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPAS1Q99742 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NPAS1Q99742 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPAS1Q99742 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPAS1Q99742 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NPAS1Q99742 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPAS1Q99742 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPAS1Q99742 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPAS1Q99742 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
NPAS1Q99742 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
NPAS1Q99742 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms