Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSPG4P5Q96PW8 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.78■□□□□ 0.92
CSPG4P5Q96PW8 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CSPG4P5Q96PW8 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CSPG4P5Q96PW8 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.78■□□□□ 0.92
CSPG4P5Q96PW8 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSPG4P5Q96PW8 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.78■□□□□ 0.92
CSPG4P5Q96PW8 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.78■□□□□ 0.92
CSPG4P5Q96PW8 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CSPG4P5Q96PW8 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSPG4P5Q96PW8 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.78■□□□□ 0.92
CSPG4P5Q96PW8 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CSPG4P5Q96PW8 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSPG4P5Q96PW8 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CSPG4P5Q96PW8 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.78■□□□□ 0.92
CSPG4P5Q96PW8 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSPG4P5Q96PW8 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSPG4P5Q96PW8 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.78■□□□□ 0.92
CSPG4P5Q96PW8 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CSPG4P5Q96PW8 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CSPG4P5Q96PW8 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CSPG4P5Q96PW8 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CSPG4P5Q96PW8 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CSPG4P5Q96PW8 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CSPG4P5Q96PW8 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
CSPG4P5Q96PW8 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CSPG4P5Q96PW8 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.77■□□□□ 0.92
CSPG4P5Q96PW8 MIPEPP3-201ENST00000412105 444 ntBASIC20.77■□□□□ 0.92
CSPG4P5Q96PW8 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.77■□□□□ 0.92
CSPG4P5Q96PW8 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.77■□□□□ 0.92
CSPG4P5Q96PW8 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CSPG4P5Q96PW8 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.77■□□□□ 0.92
CSPG4P5Q96PW8 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
CSPG4P5Q96PW8 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.77■□□□□ 0.91
CSPG4P5Q96PW8 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.91
CSPG4P5Q96PW8 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CSPG4P5Q96PW8 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.76■□□□□ 0.91
CSPG4P5Q96PW8 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.76■□□□□ 0.91
CSPG4P5Q96PW8 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CSPG4P5Q96PW8 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
CSPG4P5Q96PW8 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CSPG4P5Q96PW8 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CSPG4P5Q96PW8 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CSPG4P5Q96PW8 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.76■□□□□ 0.91
CSPG4P5Q96PW8 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.76■□□□□ 0.91
CSPG4P5Q96PW8 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.76■□□□□ 0.91
CSPG4P5Q96PW8 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CSPG4P5Q96PW8 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.76■□□□□ 0.91
CSPG4P5Q96PW8 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.76■□□□□ 0.91
CSPG4P5Q96PW8 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CSPG4P5Q96PW8 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CSPG4P5Q96PW8 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.76■□□□□ 0.91
CSPG4P5Q96PW8 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CSPG4P5Q96PW8 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CSPG4P5Q96PW8 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSPG4P5Q96PW8 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSPG4P5Q96PW8 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CSPG4P5Q96PW8 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
CSPG4P5Q96PW8 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSPG4P5Q96PW8 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSPG4P5Q96PW8 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CSPG4P5Q96PW8 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSPG4P5Q96PW8 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CSPG4P5Q96PW8 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSPG4P5Q96PW8 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CSPG4P5Q96PW8 GPX1P1-201ENST00000388829 606 ntBASIC20.75■□□□□ 0.91
CSPG4P5Q96PW8 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CSPG4P5Q96PW8 TSPY6P-201ENST00000448518 926 ntBASIC20.75■□□□□ 0.91
CSPG4P5Q96PW8 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.75■□□□□ 0.91
CSPG4P5Q96PW8 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.75■□□□□ 0.91
CSPG4P5Q96PW8 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CSPG4P5Q96PW8 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSPG4P5Q96PW8 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CSPG4P5Q96PW8 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
CSPG4P5Q96PW8 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSPG4P5Q96PW8 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSPG4P5Q96PW8 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CSPG4P5Q96PW8 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CSPG4P5Q96PW8 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CSPG4P5Q96PW8 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.74■□□□□ 0.91
CSPG4P5Q96PW8 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CSPG4P5Q96PW8 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CSPG4P5Q96PW8 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.74■□□□□ 0.91
CSPG4P5Q96PW8 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.74■□□□□ 0.91
CSPG4P5Q96PW8 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.74■□□□□ 0.91
CSPG4P5Q96PW8 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.74■□□□□ 0.91
CSPG4P5Q96PW8 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.74■□□□□ 0.91
CSPG4P5Q96PW8 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CSPG4P5Q96PW8 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CSPG4P5Q96PW8 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.74■□□□□ 0.91
CSPG4P5Q96PW8 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CSPG4P5Q96PW8 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSPG4P5Q96PW8 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSPG4P5Q96PW8 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSPG4P5Q96PW8 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
CSPG4P5Q96PW8 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSPG4P5Q96PW8 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.73■□□□□ 0.91
CSPG4P5Q96PW8 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CSPG4P5Q96PW8 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CSPG4P5Q96PW8 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms