Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PGBD4Q96DM1 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
PGBD4Q96DM1 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PGBD4Q96DM1 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.84■■□□□ 1.09
PGBD4Q96DM1 AC012618.2-201ENST00000428058 849 ntBASIC21.84■■□□□ 1.09
PGBD4Q96DM1 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PGBD4Q96DM1 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.84■■□□□ 1.09
PGBD4Q96DM1 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.84■■□□□ 1.09
PGBD4Q96DM1 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.84■■□□□ 1.09
PGBD4Q96DM1 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
PGBD4Q96DM1 AL121829.2-201ENST00000620908 328 ntBASIC21.84■■□□□ 1.09
PGBD4Q96DM1 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.84■■□□□ 1.09
PGBD4Q96DM1 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PGBD4Q96DM1 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PGBD4Q96DM1 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PGBD4Q96DM1 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PGBD4Q96DM1 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.83■■□□□ 1.09
PGBD4Q96DM1 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
PGBD4Q96DM1 AL135905.2-201ENST00000584934 1404 ntBASIC21.83■■□□□ 1.09
PGBD4Q96DM1 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PGBD4Q96DM1 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PGBD4Q96DM1 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.83■■□□□ 1.09
PGBD4Q96DM1 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PGBD4Q96DM1 AP001412.1-201ENST00000608405 714 ntBASIC21.83■■□□□ 1.09
PGBD4Q96DM1 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
PGBD4Q96DM1 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
PGBD4Q96DM1 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
PGBD4Q96DM1 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.83■■□□□ 1.08
PGBD4Q96DM1 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PGBD4Q96DM1 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PGBD4Q96DM1 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PGBD4Q96DM1 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PGBD4Q96DM1 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PGBD4Q96DM1 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.82■■□□□ 1.08
PGBD4Q96DM1 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PGBD4Q96DM1 HLA-G-202ENST00000376815 851 ntBASIC21.82■■□□□ 1.08
PGBD4Q96DM1 HLA-G-203ENST00000376818 1127 ntBASIC21.82■■□□□ 1.08
PGBD4Q96DM1 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
PGBD4Q96DM1 RPS2P55-201ENST00000397318 883 ntBASIC21.82■■□□□ 1.08
PGBD4Q96DM1 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PGBD4Q96DM1 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.82■■□□□ 1.08
PGBD4Q96DM1 AC107956.1-201ENST00000494359 873 ntBASIC21.82■■□□□ 1.08
PGBD4Q96DM1 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.82■■□□□ 1.08
PGBD4Q96DM1 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.82■■□□□ 1.08
PGBD4Q96DM1 AC233702.5-201ENST00000584107 538 ntBASIC21.82■■□□□ 1.08
PGBD4Q96DM1 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PGBD4Q96DM1 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PGBD4Q96DM1 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.82■■□□□ 1.08
PGBD4Q96DM1 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PGBD4Q96DM1 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PGBD4Q96DM1 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PGBD4Q96DM1 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
PGBD4Q96DM1 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PGBD4Q96DM1 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.81■■□□□ 1.08
PGBD4Q96DM1 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
PGBD4Q96DM1 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.81■■□□□ 1.08
PGBD4Q96DM1 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.81■■□□□ 1.08
PGBD4Q96DM1 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PGBD4Q96DM1 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PGBD4Q96DM1 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PGBD4Q96DM1 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
PGBD4Q96DM1 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.81■■□□□ 1.08
PGBD4Q96DM1 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PGBD4Q96DM1 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
PGBD4Q96DM1 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
PGBD4Q96DM1 SNORA78-201ENST00000459373 127 ntBASIC21.81■■□□□ 1.08
PGBD4Q96DM1 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.81■■□□□ 1.08
PGBD4Q96DM1 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PGBD4Q96DM1 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
PGBD4Q96DM1 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.81■■□□□ 1.08
PGBD4Q96DM1 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.81■■□□□ 1.08
PGBD4Q96DM1 AL137060.1-201ENST00000618151 2648 ntBASIC21.81■■□□□ 1.08
PGBD4Q96DM1 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PGBD4Q96DM1 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.8■■□□□ 1.08
PGBD4Q96DM1 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.8■■□□□ 1.08
PGBD4Q96DM1 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PGBD4Q96DM1 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.8■■□□□ 1.08
PGBD4Q96DM1 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PGBD4Q96DM1 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PGBD4Q96DM1 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.8■■□□□ 1.08
PGBD4Q96DM1 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PGBD4Q96DM1 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.8■■□□□ 1.08
PGBD4Q96DM1 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PGBD4Q96DM1 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.8■■□□□ 1.08
PGBD4Q96DM1 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.8■■□□□ 1.08
PGBD4Q96DM1 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PGBD4Q96DM1 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PGBD4Q96DM1 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PGBD4Q96DM1 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.8■■□□□ 1.08
PGBD4Q96DM1 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
PGBD4Q96DM1 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
PGBD4Q96DM1 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.79■■□□□ 1.08
PGBD4Q96DM1 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PGBD4Q96DM1 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PGBD4Q96DM1 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PGBD4Q96DM1 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
PGBD4Q96DM1 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PGBD4Q96DM1 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PGBD4Q96DM1 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PGBD4Q96DM1 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms