Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SH3KBP1Q96B97 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SH3KBP1Q96B97 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SH3KBP1Q96B97 ESRRAP1-201ENST00000400596 1257 ntBASIC19.89■□□□□ 0.77
SH3KBP1Q96B97 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.89■□□□□ 0.77
SH3KBP1Q96B97 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
SH3KBP1Q96B97 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SH3KBP1Q96B97 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.89■□□□□ 0.77
SH3KBP1Q96B97 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SH3KBP1Q96B97 AC006128.1-201ENST00000624704 1661 ntBASIC19.89■□□□□ 0.77
SH3KBP1Q96B97 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
SH3KBP1Q96B97 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SH3KBP1Q96B97 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SH3KBP1Q96B97 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SH3KBP1Q96B97 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SH3KBP1Q96B97 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SH3KBP1Q96B97 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
SH3KBP1Q96B97 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SH3KBP1Q96B97 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.88■□□□□ 0.77
SH3KBP1Q96B97 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SH3KBP1Q96B97 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SH3KBP1Q96B97 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.88■□□□□ 0.77
SH3KBP1Q96B97 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SH3KBP1Q96B97 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.88■□□□□ 0.77
SH3KBP1Q96B97 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.88■□□□□ 0.77
SH3KBP1Q96B97 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.88■□□□□ 0.77
SH3KBP1Q96B97 UNC93B5-201ENST00000530315 699 ntBASIC19.88■□□□□ 0.77
SH3KBP1Q96B97 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
SH3KBP1Q96B97 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.88■□□□□ 0.77
SH3KBP1Q96B97 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SH3KBP1Q96B97 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SH3KBP1Q96B97 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SH3KBP1Q96B97 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SH3KBP1Q96B97 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SH3KBP1Q96B97 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SH3KBP1Q96B97 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
SH3KBP1Q96B97 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SH3KBP1Q96B97 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.87■□□□□ 0.77
SH3KBP1Q96B97 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SH3KBP1Q96B97 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SH3KBP1Q96B97 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.87■□□□□ 0.77
SH3KBP1Q96B97 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SH3KBP1Q96B97 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.87■□□□□ 0.77
SH3KBP1Q96B97 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.87■□□□□ 0.77
SH3KBP1Q96B97 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
SH3KBP1Q96B97 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SH3KBP1Q96B97 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SH3KBP1Q96B97 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.87■□□□□ 0.77
SH3KBP1Q96B97 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.87■□□□□ 0.77
SH3KBP1Q96B97 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.87■□□□□ 0.77
SH3KBP1Q96B97 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SH3KBP1Q96B97 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.87■□□□□ 0.77
SH3KBP1Q96B97 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.87■□□□□ 0.77
SH3KBP1Q96B97 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SH3KBP1Q96B97 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.87■□□□□ 0.77
SH3KBP1Q96B97 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SH3KBP1Q96B97 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SH3KBP1Q96B97 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SH3KBP1Q96B97 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SH3KBP1Q96B97 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.86■□□□□ 0.77
SH3KBP1Q96B97 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.86■□□□□ 0.77
SH3KBP1Q96B97 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.86■□□□□ 0.77
SH3KBP1Q96B97 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SH3KBP1Q96B97 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SH3KBP1Q96B97 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SH3KBP1Q96B97 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.86■□□□□ 0.77
SH3KBP1Q96B97 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.86■□□□□ 0.77
SH3KBP1Q96B97 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SH3KBP1Q96B97 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.86■□□□□ 0.77
SH3KBP1Q96B97 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.86■□□□□ 0.77
SH3KBP1Q96B97 RNF165-205ENST00000588679 2904 ntBASIC19.86■□□□□ 0.77
SH3KBP1Q96B97 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.86■□□□□ 0.77
SH3KBP1Q96B97 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SH3KBP1Q96B97 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SH3KBP1Q96B97 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SH3KBP1Q96B97 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SH3KBP1Q96B97 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
SH3KBP1Q96B97 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.85■□□□□ 0.77
SH3KBP1Q96B97 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
SH3KBP1Q96B97 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.85■□□□□ 0.77
SH3KBP1Q96B97 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SH3KBP1Q96B97 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SH3KBP1Q96B97 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.85■□□□□ 0.77
SH3KBP1Q96B97 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.85■□□□□ 0.77
SH3KBP1Q96B97 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
SH3KBP1Q96B97 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SH3KBP1Q96B97 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.85■□□□□ 0.77
SH3KBP1Q96B97 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.85■□□□□ 0.77
SH3KBP1Q96B97 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.85■□□□□ 0.77
SH3KBP1Q96B97 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.85■□□□□ 0.77
SH3KBP1Q96B97 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.85■□□□□ 0.77
SH3KBP1Q96B97 AC026366.1-201ENST00000488803 879 ntBASIC19.85■□□□□ 0.77
SH3KBP1Q96B97 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SH3KBP1Q96B97 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.85■□□□□ 0.77
SH3KBP1Q96B97 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.85■□□□□ 0.77
SH3KBP1Q96B97 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SH3KBP1Q96B97 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SH3KBP1Q96B97 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SH3KBP1Q96B97 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SH3KBP1Q96B97 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms