Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC15.84■□□□□ 0.13
NPIPB3Q92617 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPB3Q92617 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC15.84■□□□□ 0.13
NPIPB3Q92617 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPB3Q92617 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPB3Q92617 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
NPIPB3Q92617 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC15.84■□□□□ 0.13
NPIPB3Q92617 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC15.84■□□□□ 0.13
NPIPB3Q92617 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPB3Q92617 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC15.84■□□□□ 0.13
NPIPB3Q92617 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC15.84■□□□□ 0.13
NPIPB3Q92617 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC15.84■□□□□ 0.13
NPIPB3Q92617 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC15.84■□□□□ 0.13
NPIPB3Q92617 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC15.84■□□□□ 0.13
NPIPB3Q92617 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC15.84■□□□□ 0.13
NPIPB3Q92617 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
NPIPB3Q92617 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPB3Q92617 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPB3Q92617 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC15.84■□□□□ 0.13
NPIPB3Q92617 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPB3Q92617 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPB3Q92617 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPB3Q92617 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.13
NPIPB3Q92617 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NPIPB3Q92617 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NPIPB3Q92617 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
NPIPB3Q92617 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC15.83■□□□□ 0.13
NPIPB3Q92617 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC15.83■□□□□ 0.13
NPIPB3Q92617 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC15.83■□□□□ 0.13
NPIPB3Q92617 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPB3Q92617 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPB3Q92617 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
NPIPB3Q92617 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC15.83■□□□□ 0.12
NPIPB3Q92617 MIR638-201ENST00000385237 100 ntBASIC15.83■□□□□ 0.12
NPIPB3Q92617 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
NPIPB3Q92617 CDV3P1-201ENST00000471403 739 ntBASIC15.83■□□□□ 0.12
NPIPB3Q92617 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC15.83■□□□□ 0.12
NPIPB3Q92617 RAB43-208ENST00000615093 783 ntTSL 5 BASIC15.83■□□□□ 0.12
NPIPB3Q92617 AC019069.1-201ENST00000610008 1333 ntBASIC15.83■□□□□ 0.12
NPIPB3Q92617 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPB3Q92617 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPB3Q92617 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPB3Q92617 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPB3Q92617 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPB3Q92617 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPB3Q92617 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
NPIPB3Q92617 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
NPIPB3Q92617 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPB3Q92617 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPB3Q92617 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPB3Q92617 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPB3Q92617 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPB3Q92617 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC15.82■□□□□ 0.12
NPIPB3Q92617 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPB3Q92617 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPB3Q92617 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPB3Q92617 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC15.82■□□□□ 0.12
NPIPB3Q92617 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC15.82■□□□□ 0.12
NPIPB3Q92617 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC15.82■□□□□ 0.12
NPIPB3Q92617 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC15.82■□□□□ 0.12
NPIPB3Q92617 CD44-222ENST00000526025 1052 ntTSL 2 BASIC15.82■□□□□ 0.12
NPIPB3Q92617 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC15.82■□□□□ 0.12
NPIPB3Q92617 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPB3Q92617 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPB3Q92617 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPB3Q92617 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPB3Q92617 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPB3Q92617 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPB3Q92617 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
NPIPB3Q92617 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPB3Q92617 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
NPIPB3Q92617 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPB3Q92617 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
NPIPB3Q92617 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPB3Q92617 AC125437.2-201ENST00000625180 2167 ntBASIC15.82■□□□□ 0.12
NPIPB3Q92617 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPB3Q92617 AL158211.5-201ENST00000623583 2518 ntBASIC15.82■□□□□ 0.12
NPIPB3Q92617 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.81■□□□□ 0.12
NPIPB3Q92617 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NPIPB3Q92617 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPIPB3Q92617 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPIPB3Q92617 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPIPB3Q92617 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPIPB3Q92617 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NPIPB3Q92617 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NPIPB3Q92617 SAPCD2P1-201ENST00000395413 1184 ntBASIC15.81■□□□□ 0.12
NPIPB3Q92617 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
NPIPB3Q92617 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
NPIPB3Q92617 KRT19P1-201ENST00000405746 1186 ntBASIC15.81■□□□□ 0.12
NPIPB3Q92617 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPIPB3Q92617 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC15.81■□□□□ 0.12
NPIPB3Q92617 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC15.81■□□□□ 0.12
NPIPB3Q92617 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC15.81■□□□□ 0.12
NPIPB3Q92617 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC15.81■□□□□ 0.12
NPIPB3Q92617 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPIPB3Q92617 AL691432.2-201ENST00000607222 2038 ntBASIC15.81■□□□□ 0.12
NPIPB3Q92617 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC15.81■□□□□ 0.12
NPIPB3Q92617 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC15.81■□□□□ 0.12
NPIPB3Q92617 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC15.81■□□□□ 0.12
NPIPB3Q92617 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms