Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.48■■□□□ 1.03
DDX1Q92499 AC133552.2-202ENST00000575694 574 ntBASIC21.48■■□□□ 1.03
DDX1Q92499 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
DDX1Q92499 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
DDX1Q92499 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.48■■□□□ 1.03
DDX1Q92499 AC008694.1-202ENST00000636953 945 ntBASIC21.48■■□□□ 1.03
DDX1Q92499 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
DDX1Q92499 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
DDX1Q92499 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DDX1Q92499 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DDX1Q92499 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DDX1Q92499 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DDX1Q92499 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.47■■□□□ 1.03
DDX1Q92499 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.47■■□□□ 1.03
DDX1Q92499 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DDX1Q92499 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DDX1Q92499 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.47■■□□□ 1.03
DDX1Q92499 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.47■■□□□ 1.03
DDX1Q92499 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
DDX1Q92499 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
DDX1Q92499 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
DDX1Q92499 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
DDX1Q92499 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
DDX1Q92499 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
DDX1Q92499 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DDX1Q92499 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
DDX1Q92499 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DDX1Q92499 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DDX1Q92499 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
DDX1Q92499 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DDX1Q92499 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DDX1Q92499 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DDX1Q92499 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.46■■□□□ 1.03
DDX1Q92499 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.46■■□□□ 1.03
DDX1Q92499 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.46■■□□□ 1.03
DDX1Q92499 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.46■■□□□ 1.03
DDX1Q92499 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.46■■□□□ 1.03
DDX1Q92499 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
DDX1Q92499 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
DDX1Q92499 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
DDX1Q92499 AFG3L1P-217ENST00000557444 2447 ntBASIC21.46■■□□□ 1.03
DDX1Q92499 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DDX1Q92499 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.03
DDX1Q92499 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.45■■□□□ 1.03
DDX1Q92499 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
DDX1Q92499 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
DDX1Q92499 KRT17P1-201ENST00000399211 1546 ntBASIC21.45■■□□□ 1.02
DDX1Q92499 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
DDX1Q92499 BX119927.1-201ENST00000636596 1552 ntBASIC21.45■■□□□ 1.02
DDX1Q92499 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
DDX1Q92499 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
DDX1Q92499 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
DDX1Q92499 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.45■■□□□ 1.02
DDX1Q92499 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.45■■□□□ 1.02
DDX1Q92499 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
DDX1Q92499 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
DDX1Q92499 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
DDX1Q92499 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
DDX1Q92499 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
DDX1Q92499 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
DDX1Q92499 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
DDX1Q92499 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
DDX1Q92499 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.44■■□□□ 1.02
DDX1Q92499 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
DDX1Q92499 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.44■■□□□ 1.02
DDX1Q92499 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.44■■□□□ 1.02
DDX1Q92499 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.44■■□□□ 1.02
DDX1Q92499 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
DDX1Q92499 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.44■■□□□ 1.02
DDX1Q92499 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.44■■□□□ 1.02
DDX1Q92499 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.44■■□□□ 1.02
DDX1Q92499 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
DDX1Q92499 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.44■■□□□ 1.02
DDX1Q92499 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.44■■□□□ 1.02
DDX1Q92499 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.44■■□□□ 1.02
DDX1Q92499 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
DDX1Q92499 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.44■■□□□ 1.02
DDX1Q92499 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
DDX1Q92499 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
DDX1Q92499 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.43■■□□□ 1.02
DDX1Q92499 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
DDX1Q92499 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
DDX1Q92499 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
DDX1Q92499 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.43■■□□□ 1.02
DDX1Q92499 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.43■■□□□ 1.02
DDX1Q92499 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.43■■□□□ 1.02
DDX1Q92499 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
DDX1Q92499 AF201337.1-201ENST00000520239 748 ntBASIC21.43■■□□□ 1.02
DDX1Q92499 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
DDX1Q92499 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
DDX1Q92499 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
DDX1Q92499 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.43■■□□□ 1.02
DDX1Q92499 AL691432.2-201ENST00000607222 2038 ntBASIC21.43■■□□□ 1.02
DDX1Q92499 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
DDX1Q92499 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
DDX1Q92499 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
DDX1Q92499 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
DDX1Q92499 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
DDX1Q92499 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
DDX1Q92499 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms