Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 AL049796.1-201ENST00000565336 1766 ntBASIC26.51■■□□□ 1.83
RAPGEF4Q8WZA2 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC26.51■■□□□ 1.83
RAPGEF4Q8WZA2 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RAPGEF4Q8WZA2 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC26.5■■□□□ 1.83
RAPGEF4Q8WZA2 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
RAPGEF4Q8WZA2 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC26.5■■□□□ 1.83
RAPGEF4Q8WZA2 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
RAPGEF4Q8WZA2 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
RAPGEF4Q8WZA2 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RAPGEF4Q8WZA2 AL024507.2-201ENST00000606070 2574 ntBASIC26.5■■□□□ 1.83
RAPGEF4Q8WZA2 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
RAPGEF4Q8WZA2 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC26.5■■□□□ 1.83
RAPGEF4Q8WZA2 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
RAPGEF4Q8WZA2 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
RAPGEF4Q8WZA2 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC26.5■■□□□ 1.83
RAPGEF4Q8WZA2 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC26.5■■□□□ 1.83
RAPGEF4Q8WZA2 NUDT16P1-203ENST00000513809 620 ntBASIC26.5■■□□□ 1.83
RAPGEF4Q8WZA2 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC26.5■■□□□ 1.83
RAPGEF4Q8WZA2 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC26.5■■□□□ 1.83
RAPGEF4Q8WZA2 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC26.5■■□□□ 1.83
RAPGEF4Q8WZA2 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC26.5■■□□□ 1.83
RAPGEF4Q8WZA2 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RAPGEF4Q8WZA2 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
RAPGEF4Q8WZA2 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC26.5■■□□□ 1.83
RAPGEF4Q8WZA2 FBXW4P1-201ENST00000426721 2239 ntBASIC26.5■■□□□ 1.83
RAPGEF4Q8WZA2 PTBP1P-201ENST00000554374 1601 ntBASIC26.5■■□□□ 1.83
RAPGEF4Q8WZA2 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC26.49■■□□□ 1.83
RAPGEF4Q8WZA2 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
RAPGEF4Q8WZA2 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
RAPGEF4Q8WZA2 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
RAPGEF4Q8WZA2 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC26.49■■□□□ 1.83
RAPGEF4Q8WZA2 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC26.49■■□□□ 1.83
RAPGEF4Q8WZA2 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
RAPGEF4Q8WZA2 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC26.49■■□□□ 1.83
RAPGEF4Q8WZA2 RBM17P1-201ENST00000453646 1190 ntBASIC26.49■■□□□ 1.83
RAPGEF4Q8WZA2 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC26.49■■□□□ 1.83
RAPGEF4Q8WZA2 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
RAPGEF4Q8WZA2 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
RAPGEF4Q8WZA2 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC26.48■■□□□ 1.83
RAPGEF4Q8WZA2 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
RAPGEF4Q8WZA2 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RAPGEF4Q8WZA2 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RAPGEF4Q8WZA2 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RAPGEF4Q8WZA2 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RAPGEF4Q8WZA2 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RAPGEF4Q8WZA2 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RAPGEF4Q8WZA2 TMPOP1-202ENST00000424642 1267 ntBASIC26.48■■□□□ 1.83
RAPGEF4Q8WZA2 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC26.48■■□□□ 1.83
RAPGEF4Q8WZA2 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC26.48■■□□□ 1.83
RAPGEF4Q8WZA2 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC26.48■■□□□ 1.83
RAPGEF4Q8WZA2 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
RAPGEF4Q8WZA2 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
RAPGEF4Q8WZA2 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RAPGEF4Q8WZA2 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RAPGEF4Q8WZA2 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC26.48■■□□□ 1.83
RAPGEF4Q8WZA2 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC26.48■■□□□ 1.83
RAPGEF4Q8WZA2 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
RAPGEF4Q8WZA2 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
RAPGEF4Q8WZA2 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RAPGEF4Q8WZA2 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
RAPGEF4Q8WZA2 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC26.47■■□□□ 1.83
RAPGEF4Q8WZA2 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
RAPGEF4Q8WZA2 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RAPGEF4Q8WZA2 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RAPGEF4Q8WZA2 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC26.47■■□□□ 1.83
RAPGEF4Q8WZA2 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC26.47■■□□□ 1.83
RAPGEF4Q8WZA2 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC26.47■■□□□ 1.83
RAPGEF4Q8WZA2 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
RAPGEF4Q8WZA2 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
RAPGEF4Q8WZA2 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RAPGEF4Q8WZA2 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RAPGEF4Q8WZA2 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RAPGEF4Q8WZA2 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC26.46■■□□□ 1.83
RAPGEF4Q8WZA2 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RAPGEF4Q8WZA2 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC26.46■■□□□ 1.83
RAPGEF4Q8WZA2 RN7SL850P-201ENST00000579959 291 ntBASIC26.46■■□□□ 1.83
RAPGEF4Q8WZA2 REXO1L10P-201ENST00000615707 1290 ntBASIC26.46■■□□□ 1.83
RAPGEF4Q8WZA2 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC26.46■■□□□ 1.83
RAPGEF4Q8WZA2 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RAPGEF4Q8WZA2 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RAPGEF4Q8WZA2 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC26.45■■□□□ 1.83
RAPGEF4Q8WZA2 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC26.45■■□□□ 1.83
RAPGEF4Q8WZA2 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.83
RAPGEF4Q8WZA2 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC26.45■■□□□ 1.83
RAPGEF4Q8WZA2 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
RAPGEF4Q8WZA2 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
RAPGEF4Q8WZA2 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC26.45■■□□□ 1.82
RAPGEF4Q8WZA2 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
RAPGEF4Q8WZA2 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC26.45■■□□□ 1.82
RAPGEF4Q8WZA2 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC26.45■■□□□ 1.82
RAPGEF4Q8WZA2 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
RAPGEF4Q8WZA2 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC26.45■■□□□ 1.82
RAPGEF4Q8WZA2 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
RAPGEF4Q8WZA2 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
RAPGEF4Q8WZA2 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC26.44■■□□□ 1.82
RAPGEF4Q8WZA2 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
RAPGEF4Q8WZA2 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
RAPGEF4Q8WZA2 AC079598.2-202ENST00000546624 1451 ntBASIC26.44■■□□□ 1.82
RAPGEF4Q8WZA2 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
RAPGEF4Q8WZA2 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms