Protein–RNA interactions for Protein: Q8WXF1

PSPC1, Paraspeckle component 1, humanhuman

Known RBP Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1Q8WXF1 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PSPC1Q8WXF1 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
PSPC1Q8WXF1 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PSPC1Q8WXF1 AC069544.1-201ENST00000609399 999 ntBASIC22.25■■□□□ 1.15
PSPC1Q8WXF1 AC120498.8-201ENST00000614275 531 ntBASIC22.25■■□□□ 1.15
PSPC1Q8WXF1 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
PSPC1Q8WXF1 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
PSPC1Q8WXF1 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC22.25■■□□□ 1.15
PSPC1Q8WXF1 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC22.25■■□□□ 1.15
PSPC1Q8WXF1 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC22.24■■□□□ 1.15
PSPC1Q8WXF1 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC22.24■■□□□ 1.15
PSPC1Q8WXF1 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PSPC1Q8WXF1 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
PSPC1Q8WXF1 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PSPC1Q8WXF1 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
PSPC1Q8WXF1 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PSPC1Q8WXF1 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
PSPC1Q8WXF1 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
PSPC1Q8WXF1 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PSPC1Q8WXF1 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PSPC1Q8WXF1 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PSPC1Q8WXF1 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PSPC1Q8WXF1 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC22.24■■□□□ 1.15
PSPC1Q8WXF1 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PSPC1Q8WXF1 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
PSPC1Q8WXF1 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
PSPC1Q8WXF1 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
PSPC1Q8WXF1 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PSPC1Q8WXF1 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC22.24■■□□□ 1.15
PSPC1Q8WXF1 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC22.24■■□□□ 1.15
PSPC1Q8WXF1 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PSPC1Q8WXF1 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC22.24■■□□□ 1.15
PSPC1Q8WXF1 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC22.24■■□□□ 1.15
PSPC1Q8WXF1 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PSPC1Q8WXF1 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC22.23■■□□□ 1.15
PSPC1Q8WXF1 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC22.23■■□□□ 1.15
PSPC1Q8WXF1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PSPC1Q8WXF1 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
PSPC1Q8WXF1 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
PSPC1Q8WXF1 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
PSPC1Q8WXF1 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC22.23■■□□□ 1.15
PSPC1Q8WXF1 AC233263.1-201ENST00000578059 224 ntBASIC22.23■■□□□ 1.15
PSPC1Q8WXF1 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC22.23■■□□□ 1.15
PSPC1Q8WXF1 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC22.23■■□□□ 1.15
PSPC1Q8WXF1 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PSPC1Q8WXF1 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC22.23■■□□□ 1.15
PSPC1Q8WXF1 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PSPC1Q8WXF1 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
PSPC1Q8WXF1 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC22.23■■□□□ 1.15
PSPC1Q8WXF1 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC22.22■■□□□ 1.15
PSPC1Q8WXF1 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC22.22■■□□□ 1.15
PSPC1Q8WXF1 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
PSPC1Q8WXF1 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PSPC1Q8WXF1 BID-203ENST00000399765 1879 ntTSL 2 BASIC22.22■■□□□ 1.15
PSPC1Q8WXF1 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC22.22■■□□□ 1.15
PSPC1Q8WXF1 RPS2P52-201ENST00000469610 820 ntBASIC22.22■■□□□ 1.15
PSPC1Q8WXF1 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PSPC1Q8WXF1 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
PSPC1Q8WXF1 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC22.22■■□□□ 1.15
PSPC1Q8WXF1 AC142381.4-202ENST00000563973 229 ntBASIC22.22■■□□□ 1.15
PSPC1Q8WXF1 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC22.22■■□□□ 1.15
PSPC1Q8WXF1 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PSPC1Q8WXF1 AC066615.1-201ENST00000640911 628 ntBASIC22.22■■□□□ 1.15
PSPC1Q8WXF1 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
PSPC1Q8WXF1 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PSPC1Q8WXF1 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PSPC1Q8WXF1 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC22.22■■□□□ 1.15
PSPC1Q8WXF1 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PSPC1Q8WXF1 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PSPC1Q8WXF1 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
PSPC1Q8WXF1 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
PSPC1Q8WXF1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PSPC1Q8WXF1 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC22.21■■□□□ 1.15
PSPC1Q8WXF1 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
PSPC1Q8WXF1 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PSPC1Q8WXF1 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PSPC1Q8WXF1 AL158047.1-201ENST00000445918 881 ntBASIC22.21■■□□□ 1.15
PSPC1Q8WXF1 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC22.21■■□□□ 1.15
PSPC1Q8WXF1 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC22.21■■□□□ 1.15
PSPC1Q8WXF1 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC22.21■■□□□ 1.15
PSPC1Q8WXF1 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC22.21■■□□□ 1.15
PSPC1Q8WXF1 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC22.21■■□□□ 1.15
PSPC1Q8WXF1 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
PSPC1Q8WXF1 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
PSPC1Q8WXF1 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PSPC1Q8WXF1 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PSPC1Q8WXF1 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC22.21■■□□□ 1.15
PSPC1Q8WXF1 PTBP1P-201ENST00000554374 1601 ntBASIC22.2■■□□□ 1.15
PSPC1Q8WXF1 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC22.2■■□□□ 1.14
PSPC1Q8WXF1 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC22.2■■□□□ 1.14
PSPC1Q8WXF1 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
PSPC1Q8WXF1 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PSPC1Q8WXF1 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
PSPC1Q8WXF1 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC22.2■■□□□ 1.14
PSPC1Q8WXF1 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PSPC1Q8WXF1 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC22.2■■□□□ 1.14
PSPC1Q8WXF1 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PSPC1Q8WXF1 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC22.2■■□□□ 1.14
PSPC1Q8WXF1 RN7SL471P-201ENST00000580476 299 ntBASIC22.2■■□□□ 1.14
PSPC1Q8WXF1 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms