Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RTN4IP1Q8WWV3 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
RTN4IP1Q8WWV3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RTN4IP1Q8WWV3 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC16.89■□□□□ 0.29
RTN4IP1Q8WWV3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC16.89■□□□□ 0.29
RTN4IP1Q8WWV3 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
RTN4IP1Q8WWV3 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC16.89■□□□□ 0.29
RTN4IP1Q8WWV3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RTN4IP1Q8WWV3 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RTN4IP1Q8WWV3 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RTN4IP1Q8WWV3 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RTN4IP1Q8WWV3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RTN4IP1Q8WWV3 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTN4IP1Q8WWV3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.88■□□□□ 0.29
RTN4IP1Q8WWV3 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTN4IP1Q8WWV3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTN4IP1Q8WWV3 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RTN4IP1Q8WWV3 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RTN4IP1Q8WWV3 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTN4IP1Q8WWV3 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTN4IP1Q8WWV3 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTN4IP1Q8WWV3 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC16.88■□□□□ 0.29
RTN4IP1Q8WWV3 SLC7A5P2-201ENST00000553010 536 ntBASIC16.88■□□□□ 0.29
RTN4IP1Q8WWV3 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTN4IP1Q8WWV3 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
RTN4IP1Q8WWV3 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RTN4IP1Q8WWV3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RTN4IP1Q8WWV3 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
RTN4IP1Q8WWV3 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTN4IP1Q8WWV3 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTN4IP1Q8WWV3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTN4IP1Q8WWV3 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RTN4IP1Q8WWV3 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RTN4IP1Q8WWV3 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTN4IP1Q8WWV3 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RTN4IP1Q8WWV3 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
RTN4IP1Q8WWV3 BX323043.1-201ENST00000641006 1765 ntBASIC16.87■□□□□ 0.29
RTN4IP1Q8WWV3 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RTN4IP1Q8WWV3 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTN4IP1Q8WWV3 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTN4IP1Q8WWV3 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC16.87■□□□□ 0.29
RTN4IP1Q8WWV3 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTN4IP1Q8WWV3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTN4IP1Q8WWV3 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.87■□□□□ 0.29
RTN4IP1Q8WWV3 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTN4IP1Q8WWV3 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTN4IP1Q8WWV3 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
RTN4IP1Q8WWV3 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC16.87■□□□□ 0.29
RTN4IP1Q8WWV3 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.87■□□□□ 0.29
RTN4IP1Q8WWV3 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC16.87■□□□□ 0.29
RTN4IP1Q8WWV3 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC16.87■□□□□ 0.29
RTN4IP1Q8WWV3 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RTN4IP1Q8WWV3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTN4IP1Q8WWV3 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTN4IP1Q8WWV3 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTN4IP1Q8WWV3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTN4IP1Q8WWV3 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTN4IP1Q8WWV3 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RTN4IP1Q8WWV3 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTN4IP1Q8WWV3 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RTN4IP1Q8WWV3 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTN4IP1Q8WWV3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RTN4IP1Q8WWV3 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RTN4IP1Q8WWV3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RTN4IP1Q8WWV3 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTN4IP1Q8WWV3 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
RTN4IP1Q8WWV3 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTN4IP1Q8WWV3 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.86■□□□□ 0.29
RTN4IP1Q8WWV3 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.86■□□□□ 0.29
RTN4IP1Q8WWV3 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.86■□□□□ 0.29
RTN4IP1Q8WWV3 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
RTN4IP1Q8WWV3 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTN4IP1Q8WWV3 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RTN4IP1Q8WWV3 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTN4IP1Q8WWV3 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTN4IP1Q8WWV3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTN4IP1Q8WWV3 KRT18P5-201ENST00000436075 1291 ntBASIC16.86■□□□□ 0.29
RTN4IP1Q8WWV3 AC245052.3-201ENST00000450182 901 ntBASIC16.86■□□□□ 0.29
RTN4IP1Q8WWV3 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC16.86■□□□□ 0.29
RTN4IP1Q8WWV3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTN4IP1Q8WWV3 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTN4IP1Q8WWV3 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC16.86■□□□□ 0.29
RTN4IP1Q8WWV3 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RTN4IP1Q8WWV3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTN4IP1Q8WWV3 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC16.86■□□□□ 0.29
RTN4IP1Q8WWV3 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTN4IP1Q8WWV3 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTN4IP1Q8WWV3 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RTN4IP1Q8WWV3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RTN4IP1Q8WWV3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RTN4IP1Q8WWV3 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
RTN4IP1Q8WWV3 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTN4IP1Q8WWV3 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTN4IP1Q8WWV3 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTN4IP1Q8WWV3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16.85■□□□□ 0.29
RTN4IP1Q8WWV3 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RTN4IP1Q8WWV3 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
RTN4IP1Q8WWV3 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTN4IP1Q8WWV3 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC16.85■□□□□ 0.29
RTN4IP1Q8WWV3 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms