Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CKAP2Q8WWK9 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CKAP2Q8WWK9 POU5F1P4-201ENST00000413175 1085 ntBASIC19.97■□□□□ 0.79
CKAP2Q8WWK9 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.97■□□□□ 0.79
CKAP2Q8WWK9 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CKAP2Q8WWK9 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.97■□□□□ 0.79
CKAP2Q8WWK9 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CKAP2Q8WWK9 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.97■□□□□ 0.79
CKAP2Q8WWK9 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CKAP2Q8WWK9 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CKAP2Q8WWK9 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.97■□□□□ 0.79
CKAP2Q8WWK9 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CKAP2Q8WWK9 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.97■□□□□ 0.79
CKAP2Q8WWK9 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.97■□□□□ 0.79
CKAP2Q8WWK9 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.97■□□□□ 0.79
CKAP2Q8WWK9 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CKAP2Q8WWK9 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CKAP2Q8WWK9 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CKAP2Q8WWK9 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CKAP2Q8WWK9 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CKAP2Q8WWK9 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CKAP2Q8WWK9 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
CKAP2Q8WWK9 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.96■□□□□ 0.79
CKAP2Q8WWK9 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CKAP2Q8WWK9 AC131212.1-201ENST00000613771 668 ntBASIC19.96■□□□□ 0.79
CKAP2Q8WWK9 AC105233.4-201ENST00000642045 216 ntBASIC19.96■□□□□ 0.79
CKAP2Q8WWK9 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CKAP2Q8WWK9 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CKAP2Q8WWK9 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CKAP2Q8WWK9 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CKAP2Q8WWK9 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CKAP2Q8WWK9 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CKAP2Q8WWK9 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CKAP2Q8WWK9 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
CKAP2Q8WWK9 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.95■□□□□ 0.78
CKAP2Q8WWK9 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.95■□□□□ 0.78
CKAP2Q8WWK9 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CKAP2Q8WWK9 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CKAP2Q8WWK9 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CKAP2Q8WWK9 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CKAP2Q8WWK9 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CKAP2Q8WWK9 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CKAP2Q8WWK9 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CKAP2Q8WWK9 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CKAP2Q8WWK9 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CKAP2Q8WWK9 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CKAP2Q8WWK9 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CKAP2Q8WWK9 AC245052.3-201ENST00000450182 901 ntBASIC19.95■□□□□ 0.78
CKAP2Q8WWK9 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.95■□□□□ 0.78
CKAP2Q8WWK9 AC008175.2-201ENST00000612840 297 ntBASIC19.95■□□□□ 0.78
CKAP2Q8WWK9 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.95■□□□□ 0.78
CKAP2Q8WWK9 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CKAP2Q8WWK9 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CKAP2Q8WWK9 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.95■□□□□ 0.78
CKAP2Q8WWK9 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.95■□□□□ 0.78
CKAP2Q8WWK9 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.95■□□□□ 0.78
CKAP2Q8WWK9 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CKAP2Q8WWK9 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CKAP2Q8WWK9 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.94■□□□□ 0.78
CKAP2Q8WWK9 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CKAP2Q8WWK9 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.94■□□□□ 0.78
CKAP2Q8WWK9 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.94■□□□□ 0.78
CKAP2Q8WWK9 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
CKAP2Q8WWK9 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CKAP2Q8WWK9 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CKAP2Q8WWK9 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.94■□□□□ 0.78
CKAP2Q8WWK9 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.94■□□□□ 0.78
CKAP2Q8WWK9 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.94■□□□□ 0.78
CKAP2Q8WWK9 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.94■□□□□ 0.78
CKAP2Q8WWK9 MIR4466-201ENST00000606121 54 ntBASIC19.94■□□□□ 0.78
CKAP2Q8WWK9 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CKAP2Q8WWK9 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CKAP2Q8WWK9 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CKAP2Q8WWK9 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CKAP2Q8WWK9 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CKAP2Q8WWK9 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CKAP2Q8WWK9 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.94■□□□□ 0.78
CKAP2Q8WWK9 AL032819.2-201ENST00000624543 2162 ntBASIC19.94■□□□□ 0.78
CKAP2Q8WWK9 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CKAP2Q8WWK9 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CKAP2Q8WWK9 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CKAP2Q8WWK9 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CKAP2Q8WWK9 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CKAP2Q8WWK9 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CKAP2Q8WWK9 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
CKAP2Q8WWK9 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CKAP2Q8WWK9 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CKAP2Q8WWK9 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.93■□□□□ 0.78
CKAP2Q8WWK9 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.93■□□□□ 0.78
CKAP2Q8WWK9 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CKAP2Q8WWK9 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CKAP2Q8WWK9 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.93■□□□□ 0.78
CKAP2Q8WWK9 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CKAP2Q8WWK9 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CKAP2Q8WWK9 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CKAP2Q8WWK9 AC233992.3-201ENST00000607491 485 ntBASIC19.93■□□□□ 0.78
CKAP2Q8WWK9 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CKAP2Q8WWK9 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.93■□□□□ 0.78
CKAP2Q8WWK9 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.93■□□□□ 0.78
CKAP2Q8WWK9 LINC01465-201ENST00000408887 1940 ntBASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms