Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC34.57■■■■□ 3.13
TRIM41Q8WV44 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
TRIM41Q8WV44 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC34.57■■■■□ 3.12
TRIM41Q8WV44 AC113347.1-201ENST00000413321 391 ntBASIC34.57■■■■□ 3.12
TRIM41Q8WV44 WWOX-216ENST00000569818 525 ntBASIC34.57■■■■□ 3.12
TRIM41Q8WV44 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC34.57■■■■□ 3.12
TRIM41Q8WV44 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
TRIM41Q8WV44 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC34.56■■■■□ 3.12
TRIM41Q8WV44 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC34.56■■■■□ 3.12
TRIM41Q8WV44 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC34.56■■■■□ 3.12
TRIM41Q8WV44 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC34.56■■■■□ 3.12
TRIM41Q8WV44 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC34.56■■■■□ 3.12
TRIM41Q8WV44 AC104076.2-201ENST00000448912 469 ntBASIC34.56■■■■□ 3.12
TRIM41Q8WV44 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC34.56■■■■□ 3.12
TRIM41Q8WV44 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC34.56■■■■□ 3.12
TRIM41Q8WV44 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC34.56■■■■□ 3.12
TRIM41Q8WV44 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC34.56■■■■□ 3.12
TRIM41Q8WV44 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC34.56■■■■□ 3.12
TRIM41Q8WV44 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC34.56■■■■□ 3.12
TRIM41Q8WV44 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC34.56■■■■□ 3.12
TRIM41Q8WV44 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC34.55■■■■□ 3.12
TRIM41Q8WV44 AC121338.2-201ENST00000622535 1744 ntBASIC34.55■■■■□ 3.12
TRIM41Q8WV44 CFL2-205ENST00000555765 632 ntTSL 2 BASIC34.55■■■■□ 3.12
TRIM41Q8WV44 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC34.55■■■■□ 3.12
TRIM41Q8WV44 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC34.55■■■■□ 3.12
TRIM41Q8WV44 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC34.55■■■■□ 3.12
TRIM41Q8WV44 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC34.55■■■■□ 3.12
TRIM41Q8WV44 AL135905.2-201ENST00000584934 1404 ntBASIC34.55■■■■□ 3.12
TRIM41Q8WV44 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
TRIM41Q8WV44 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC34.54■■■■□ 3.12
TRIM41Q8WV44 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
TRIM41Q8WV44 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
TRIM41Q8WV44 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
TRIM41Q8WV44 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC34.54■■■■□ 3.12
TRIM41Q8WV44 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
TRIM41Q8WV44 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
TRIM41Q8WV44 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
TRIM41Q8WV44 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
TRIM41Q8WV44 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
TRIM41Q8WV44 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
TRIM41Q8WV44 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
TRIM41Q8WV44 AC027702.1-201ENST00000563810 1770 ntBASIC34.54■■■■□ 3.12
TRIM41Q8WV44 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC34.54■■■■□ 3.12
TRIM41Q8WV44 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
TRIM41Q8WV44 STAC-204ENST00000457375 1366 ntTSL 2 BASIC34.53■■■■□ 3.12
TRIM41Q8WV44 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
TRIM41Q8WV44 CRYGFP-201ENST00000418459 633 ntBASIC34.53■■■■□ 3.12
TRIM41Q8WV44 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC34.53■■■■□ 3.12
TRIM41Q8WV44 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
TRIM41Q8WV44 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
TRIM41Q8WV44 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC34.53■■■■□ 3.12
TRIM41Q8WV44 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC34.52■■■■□ 3.12
TRIM41Q8WV44 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC34.52■■■■□ 3.12
TRIM41Q8WV44 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC34.52■■■■□ 3.12
TRIM41Q8WV44 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC34.52■■■■□ 3.12
TRIM41Q8WV44 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC34.52■■■■□ 3.12
TRIM41Q8WV44 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
TRIM41Q8WV44 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC34.52■■■■□ 3.12
TRIM41Q8WV44 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC34.52■■■■□ 3.12
TRIM41Q8WV44 AL356652.1-201ENST00000615962 565 ntBASIC34.52■■■■□ 3.12
TRIM41Q8WV44 DECR2-212ENST00000627716 352 ntTSL 2 BASIC34.52■■■■□ 3.12
TRIM41Q8WV44 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC34.52■■■■□ 3.12
TRIM41Q8WV44 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC34.52■■■■□ 3.12
TRIM41Q8WV44 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC34.51■■■■□ 3.12
TRIM41Q8WV44 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC34.51■■■■□ 3.12
TRIM41Q8WV44 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.12
TRIM41Q8WV44 PLK5-205ENST00000642079 1969 ntBASIC34.51■■■■□ 3.12
TRIM41Q8WV44 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC34.51■■■■□ 3.12
TRIM41Q8WV44 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC34.51■■■■□ 3.12
TRIM41Q8WV44 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC34.51■■■■□ 3.12
TRIM41Q8WV44 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC34.51■■■■□ 3.12
TRIM41Q8WV44 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC34.51■■■■□ 3.12
TRIM41Q8WV44 AL031963.3-201ENST00000606441 850 ntBASIC34.51■■■■□ 3.12
TRIM41Q8WV44 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC34.51■■■■□ 3.12
TRIM41Q8WV44 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC34.51■■■■□ 3.12
TRIM41Q8WV44 Six3os1_6.1-201ENST00000620790 196 ntBASIC34.51■■■■□ 3.12
TRIM41Q8WV44 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC34.51■■■■□ 3.12
TRIM41Q8WV44 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.11
TRIM41Q8WV44 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC34.51■■■■□ 3.11
TRIM41Q8WV44 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC34.51■■■■□ 3.11
TRIM41Q8WV44 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC34.5■■■■□ 3.11
TRIM41Q8WV44 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC34.5■■■■□ 3.11
TRIM41Q8WV44 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC34.5■■■■□ 3.11
TRIM41Q8WV44 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC34.5■■■■□ 3.11
TRIM41Q8WV44 AC091076.1-201ENST00000610741 619 ntBASIC34.5■■■■□ 3.11
TRIM41Q8WV44 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC34.5■■■■□ 3.11
TRIM41Q8WV44 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
TRIM41Q8WV44 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
TRIM41Q8WV44 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC34.5■■■■□ 3.11
TRIM41Q8WV44 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
TRIM41Q8WV44 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC34.5■■■■□ 3.11
TRIM41Q8WV44 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
TRIM41Q8WV44 NXN-202ENST00000537628 1340 ntTSL 3 BASIC34.5■■■■□ 3.11
TRIM41Q8WV44 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
TRIM41Q8WV44 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
TRIM41Q8WV44 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
TRIM41Q8WV44 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC34.49■■■■□ 3.11
TRIM41Q8WV44 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
TRIM41Q8WV44 IPPK-202ENST00000375522 882 ntTSL 3 BASIC34.49■■■■□ 3.11
TRIM41Q8WV44 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms