Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SH3RF2Q8TEC5 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SH3RF2Q8TEC5 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.92■□□□□ 0.94
SH3RF2Q8TEC5 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SH3RF2Q8TEC5 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SH3RF2Q8TEC5 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.92■□□□□ 0.94
SH3RF2Q8TEC5 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SH3RF2Q8TEC5 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SH3RF2Q8TEC5 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SH3RF2Q8TEC5 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.92■□□□□ 0.94
SH3RF2Q8TEC5 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.92■□□□□ 0.94
SH3RF2Q8TEC5 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.92■□□□□ 0.94
SH3RF2Q8TEC5 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.92■□□□□ 0.94
SH3RF2Q8TEC5 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SH3RF2Q8TEC5 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.92■□□□□ 0.94
SH3RF2Q8TEC5 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SH3RF2Q8TEC5 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SH3RF2Q8TEC5 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SH3RF2Q8TEC5 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SH3RF2Q8TEC5 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SH3RF2Q8TEC5 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SH3RF2Q8TEC5 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SH3RF2Q8TEC5 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SH3RF2Q8TEC5 AC133681.1-201ENST00000465482 601 ntBASIC20.91■□□□□ 0.94
SH3RF2Q8TEC5 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.91■□□□□ 0.94
SH3RF2Q8TEC5 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.91■□□□□ 0.94
SH3RF2Q8TEC5 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.91■□□□□ 0.94
SH3RF2Q8TEC5 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SH3RF2Q8TEC5 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.91■□□□□ 0.94
SH3RF2Q8TEC5 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SH3RF2Q8TEC5 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.91■□□□□ 0.94
SH3RF2Q8TEC5 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SH3RF2Q8TEC5 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SH3RF2Q8TEC5 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SH3RF2Q8TEC5 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SH3RF2Q8TEC5 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
SH3RF2Q8TEC5 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
SH3RF2Q8TEC5 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SH3RF2Q8TEC5 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SH3RF2Q8TEC5 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SH3RF2Q8TEC5 KRASP1-201ENST00000407852 552 ntBASIC20.9■□□□□ 0.94
SH3RF2Q8TEC5 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.9■□□□□ 0.94
SH3RF2Q8TEC5 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SH3RF2Q8TEC5 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.9■□□□□ 0.94
SH3RF2Q8TEC5 AC023632.3-201ENST00000521633 145 ntBASIC20.9■□□□□ 0.94
SH3RF2Q8TEC5 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.9■□□□□ 0.94
SH3RF2Q8TEC5 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
SH3RF2Q8TEC5 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.9■□□□□ 0.94
SH3RF2Q8TEC5 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.9■□□□□ 0.94
SH3RF2Q8TEC5 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SH3RF2Q8TEC5 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SH3RF2Q8TEC5 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SH3RF2Q8TEC5 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
SH3RF2Q8TEC5 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SH3RF2Q8TEC5 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SH3RF2Q8TEC5 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SH3RF2Q8TEC5 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.89■□□□□ 0.94
SH3RF2Q8TEC5 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
SH3RF2Q8TEC5 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SH3RF2Q8TEC5 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
SH3RF2Q8TEC5 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SH3RF2Q8TEC5 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SH3RF2Q8TEC5 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SH3RF2Q8TEC5 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SH3RF2Q8TEC5 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SH3RF2Q8TEC5 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SH3RF2Q8TEC5 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.89■□□□□ 0.93
SH3RF2Q8TEC5 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.89■□□□□ 0.93
SH3RF2Q8TEC5 MIR4497-201ENST00000583208 89 ntBASIC20.89■□□□□ 0.93
SH3RF2Q8TEC5 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.89■□□□□ 0.93
SH3RF2Q8TEC5 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SH3RF2Q8TEC5 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SH3RF2Q8TEC5 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.89■□□□□ 0.93
SH3RF2Q8TEC5 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.89■□□□□ 0.93
SH3RF2Q8TEC5 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SH3RF2Q8TEC5 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SH3RF2Q8TEC5 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.88■□□□□ 0.93
SH3RF2Q8TEC5 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
SH3RF2Q8TEC5 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SH3RF2Q8TEC5 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SH3RF2Q8TEC5 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.88■□□□□ 0.93
SH3RF2Q8TEC5 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.88■□□□□ 0.93
SH3RF2Q8TEC5 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.88■□□□□ 0.93
SH3RF2Q8TEC5 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SH3RF2Q8TEC5 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SH3RF2Q8TEC5 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SH3RF2Q8TEC5 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SH3RF2Q8TEC5 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SH3RF2Q8TEC5 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SH3RF2Q8TEC5 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SH3RF2Q8TEC5 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SH3RF2Q8TEC5 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SH3RF2Q8TEC5 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SH3RF2Q8TEC5 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SH3RF2Q8TEC5 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.87■□□□□ 0.93
SH3RF2Q8TEC5 SNORA78-201ENST00000459373 127 ntBASIC20.87■□□□□ 0.93
SH3RF2Q8TEC5 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.87■□□□□ 0.93
SH3RF2Q8TEC5 AC110285.5-201ENST00000611501 352 ntBASIC20.87■□□□□ 0.93
SH3RF2Q8TEC5 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SH3RF2Q8TEC5 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms