Protein–RNA interactions for Protein: Q8NBP7

PCSK9, Proprotein convertase subtilisin/kexin type 9, humanhuman

Known RBP Predictions only

Length 692 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9Q8NBP7 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PCSK9Q8NBP7 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCSK9Q8NBP7 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC22.33■■□□□ 1.17
PCSK9Q8NBP7 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC22.33■■□□□ 1.17
PCSK9Q8NBP7 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC22.33■■□□□ 1.17
PCSK9Q8NBP7 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC22.33■■□□□ 1.17
PCSK9Q8NBP7 TPM1-226ENST00000560959 925 ntTSL 2 BASIC22.33■■□□□ 1.17
PCSK9Q8NBP7 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC22.33■■□□□ 1.17
PCSK9Q8NBP7 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
PCSK9Q8NBP7 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
PCSK9Q8NBP7 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
PCSK9Q8NBP7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC22.32■■□□□ 1.16
PCSK9Q8NBP7 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCSK9Q8NBP7 KRT16P1-201ENST00000399124 1418 ntBASIC22.32■■□□□ 1.16
PCSK9Q8NBP7 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PCSK9Q8NBP7 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC22.32■■□□□ 1.16
PCSK9Q8NBP7 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCSK9Q8NBP7 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PCSK9Q8NBP7 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC22.32■■□□□ 1.16
PCSK9Q8NBP7 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC22.32■■□□□ 1.16
PCSK9Q8NBP7 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC22.32■■□□□ 1.16
PCSK9Q8NBP7 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC22.32■■□□□ 1.16
PCSK9Q8NBP7 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC22.32■■□□□ 1.16
PCSK9Q8NBP7 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC22.32■■□□□ 1.16
PCSK9Q8NBP7 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC22.32■■□□□ 1.16
PCSK9Q8NBP7 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC22.32■■□□□ 1.16
PCSK9Q8NBP7 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCSK9Q8NBP7 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC22.31■■□□□ 1.16
PCSK9Q8NBP7 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCSK9Q8NBP7 ECEL1P1-201ENST00000373592 1742 ntBASIC22.31■■□□□ 1.16
PCSK9Q8NBP7 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCSK9Q8NBP7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC22.31■■□□□ 1.16
PCSK9Q8NBP7 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCSK9Q8NBP7 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC22.31■■□□□ 1.16
PCSK9Q8NBP7 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.31■■□□□ 1.16
PCSK9Q8NBP7 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
PCSK9Q8NBP7 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCSK9Q8NBP7 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCSK9Q8NBP7 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCSK9Q8NBP7 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCSK9Q8NBP7 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC22.31■■□□□ 1.16
PCSK9Q8NBP7 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCSK9Q8NBP7 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCSK9Q8NBP7 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCSK9Q8NBP7 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC22.31■■□□□ 1.16
PCSK9Q8NBP7 DUT-205ENST00000558813 769 ntTSL 2 BASIC22.31■■□□□ 1.16
PCSK9Q8NBP7 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCSK9Q8NBP7 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC22.31■■□□□ 1.16
PCSK9Q8NBP7 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCSK9Q8NBP7 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCSK9Q8NBP7 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC22.31■■□□□ 1.16
PCSK9Q8NBP7 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCSK9Q8NBP7 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
PCSK9Q8NBP7 AC244015.2-201ENST00000616358 1861 ntBASIC22.3■■□□□ 1.16
PCSK9Q8NBP7 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCSK9Q8NBP7 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC22.3■■□□□ 1.16
PCSK9Q8NBP7 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PCSK9Q8NBP7 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PCSK9Q8NBP7 AL137013.1-201ENST00000432946 1228 ntBASIC22.3■■□□□ 1.16
PCSK9Q8NBP7 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC22.3■■□□□ 1.16
PCSK9Q8NBP7 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC22.3■■□□□ 1.16
PCSK9Q8NBP7 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
PCSK9Q8NBP7 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PCSK9Q8NBP7 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC22.3■■□□□ 1.16
PCSK9Q8NBP7 NME3-204ENST00000563498 920 ntTSL 2 BASIC22.3■■□□□ 1.16
PCSK9Q8NBP7 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC22.3■■□□□ 1.16
PCSK9Q8NBP7 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC22.3■■□□□ 1.16
PCSK9Q8NBP7 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PCSK9Q8NBP7 KRT8P20-201ENST00000423953 1409 ntBASIC22.3■■□□□ 1.16
PCSK9Q8NBP7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCSK9Q8NBP7 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCSK9Q8NBP7 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCSK9Q8NBP7 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC22.29■■□□□ 1.16
PCSK9Q8NBP7 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCSK9Q8NBP7 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PCSK9Q8NBP7 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCSK9Q8NBP7 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
PCSK9Q8NBP7 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PCSK9Q8NBP7 AL390955.1-201ENST00000428694 934 ntBASIC22.29■■□□□ 1.16
PCSK9Q8NBP7 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC22.29■■□□□ 1.16
PCSK9Q8NBP7 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PCSK9Q8NBP7 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PCSK9Q8NBP7 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC22.28■■□□□ 1.16
PCSK9Q8NBP7 CYP2D8P-201ENST00000433633 1490 ntBASIC22.28■■□□□ 1.16
PCSK9Q8NBP7 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PCSK9Q8NBP7 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCSK9Q8NBP7 CRAT-202ENST00000393384 973 ntTSL 2 BASIC22.28■■□□□ 1.16
PCSK9Q8NBP7 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PCSK9Q8NBP7 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC22.28■■□□□ 1.16
PCSK9Q8NBP7 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC22.28■■□□□ 1.16
PCSK9Q8NBP7 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC22.28■■□□□ 1.16
PCSK9Q8NBP7 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC22.28■■□□□ 1.16
PCSK9Q8NBP7 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC22.28■■□□□ 1.16
PCSK9Q8NBP7 AC010947.1-201ENST00000623454 693 ntBASIC22.28■■□□□ 1.16
PCSK9Q8NBP7 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
PCSK9Q8NBP7 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCSK9Q8NBP7 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.28■■□□□ 1.16
PCSK9Q8NBP7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PCSK9Q8NBP7 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCSK9Q8NBP7 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms