Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN22Q8N7P3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN22Q8N7P3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.3■□□□□ 0.52
CLDN22Q8N7P3 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN22Q8N7P3 KRT19P1-201ENST00000405746 1186 ntBASIC18.3■□□□□ 0.52
CLDN22Q8N7P3 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.3■□□□□ 0.52
CLDN22Q8N7P3 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN22Q8N7P3 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CLDN22Q8N7P3 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN22Q8N7P3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN22Q8N7P3 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CLDN22Q8N7P3 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
CLDN22Q8N7P3 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN22Q8N7P3 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN22Q8N7P3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CLDN22Q8N7P3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.3■□□□□ 0.52
CLDN22Q8N7P3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.3■□□□□ 0.52
CLDN22Q8N7P3 BX119927.1-201ENST00000636596 1552 ntBASIC18.3■□□□□ 0.52
CLDN22Q8N7P3 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN22Q8N7P3 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN22Q8N7P3 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN22Q8N7P3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CLDN22Q8N7P3 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN22Q8N7P3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CLDN22Q8N7P3 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN22Q8N7P3 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN22Q8N7P3 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CLDN22Q8N7P3 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN22Q8N7P3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN22Q8N7P3 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN22Q8N7P3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CLDN22Q8N7P3 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN22Q8N7P3 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN22Q8N7P3 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN22Q8N7P3 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN22Q8N7P3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.29■□□□□ 0.52
CLDN22Q8N7P3 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CLDN22Q8N7P3 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.29■□□□□ 0.52
CLDN22Q8N7P3 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.29■□□□□ 0.52
CLDN22Q8N7P3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.29■□□□□ 0.52
CLDN22Q8N7P3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN22Q8N7P3 MIR6821-201ENST00000617625 74 ntBASIC18.29■□□□□ 0.52
CLDN22Q8N7P3 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.29■□□□□ 0.52
CLDN22Q8N7P3 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CLDN22Q8N7P3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.29■□□□□ 0.52
CLDN22Q8N7P3 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN22Q8N7P3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN22Q8N7P3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.29■□□□□ 0.52
CLDN22Q8N7P3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CLDN22Q8N7P3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN22Q8N7P3 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN22Q8N7P3 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.28■□□□□ 0.52
CLDN22Q8N7P3 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN22Q8N7P3 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.28■□□□□ 0.52
CLDN22Q8N7P3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN22Q8N7P3 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CLDN22Q8N7P3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN22Q8N7P3 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN22Q8N7P3 AC116562.4-201ENST00000641316 2276 ntBASIC18.28■□□□□ 0.52
CLDN22Q8N7P3 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN22Q8N7P3 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CLDN22Q8N7P3 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN22Q8N7P3 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
CLDN22Q8N7P3 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN22Q8N7P3 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.28■□□□□ 0.52
CLDN22Q8N7P3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.28■□□□□ 0.52
CLDN22Q8N7P3 AC034268.1-201ENST00000441047 882 ntBASIC18.28■□□□□ 0.52
CLDN22Q8N7P3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN22Q8N7P3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CLDN22Q8N7P3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CLDN22Q8N7P3 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN22Q8N7P3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.28■□□□□ 0.52
CLDN22Q8N7P3 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN22Q8N7P3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CLDN22Q8N7P3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN22Q8N7P3 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN22Q8N7P3 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.28■□□□□ 0.52
CLDN22Q8N7P3 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.28■□□□□ 0.52
CLDN22Q8N7P3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CLDN22Q8N7P3 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN22Q8N7P3 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.27■□□□□ 0.52
CLDN22Q8N7P3 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.27■□□□□ 0.52
CLDN22Q8N7P3 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN22Q8N7P3 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.27■□□□□ 0.52
CLDN22Q8N7P3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
CLDN22Q8N7P3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN22Q8N7P3 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
CLDN22Q8N7P3 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN22Q8N7P3 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.27■□□□□ 0.52
CLDN22Q8N7P3 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN22Q8N7P3 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN22Q8N7P3 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN22Q8N7P3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.27■□□□□ 0.52
CLDN22Q8N7P3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.27■□□□□ 0.52
CLDN22Q8N7P3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN22Q8N7P3 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
CLDN22Q8N7P3 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLDN22Q8N7P3 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLDN22Q8N7P3 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLDN22Q8N7P3 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms