Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PAF1Q8N7H5 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.62■□□□□ 0.89
PAF1Q8N7H5 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.62■□□□□ 0.89
PAF1Q8N7H5 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.62■□□□□ 0.89
PAF1Q8N7H5 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
PAF1Q8N7H5 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PAF1Q8N7H5 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.62■□□□□ 0.89
PAF1Q8N7H5 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PAF1Q8N7H5 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
PAF1Q8N7H5 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
PAF1Q8N7H5 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PAF1Q8N7H5 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PAF1Q8N7H5 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PAF1Q8N7H5 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.62■□□□□ 0.89
PAF1Q8N7H5 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
PAF1Q8N7H5 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PAF1Q8N7H5 HR-201ENST00000312841 5351 ntTSL 5 BASIC20.62■□□□□ 0.89
PAF1Q8N7H5 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PAF1Q8N7H5 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
PAF1Q8N7H5 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PAF1Q8N7H5 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PAF1Q8N7H5 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PAF1Q8N7H5 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PAF1Q8N7H5 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PAF1Q8N7H5 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PAF1Q8N7H5 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PAF1Q8N7H5 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
PAF1Q8N7H5 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.61■□□□□ 0.89
PAF1Q8N7H5 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PAF1Q8N7H5 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.61■□□□□ 0.89
PAF1Q8N7H5 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.61■□□□□ 0.89
PAF1Q8N7H5 GUSBP6-202ENST00000438529 1198 ntBASIC20.61■□□□□ 0.89
PAF1Q8N7H5 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PAF1Q8N7H5 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.61■□□□□ 0.89
PAF1Q8N7H5 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.61■□□□□ 0.89
PAF1Q8N7H5 AC133041.1-202ENST00000642053 222 ntBASIC20.61■□□□□ 0.89
PAF1Q8N7H5 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.61■□□□□ 0.89
PAF1Q8N7H5 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.61■□□□□ 0.89
PAF1Q8N7H5 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PAF1Q8N7H5 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PAF1Q8N7H5 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.61■□□□□ 0.89
PAF1Q8N7H5 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PAF1Q8N7H5 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PAF1Q8N7H5 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
PAF1Q8N7H5 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.61■□□□□ 0.89
PAF1Q8N7H5 AC087633.2-202ENST00000565166 1439 ntBASIC20.61■□□□□ 0.89
PAF1Q8N7H5 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PAF1Q8N7H5 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
PAF1Q8N7H5 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.6■□□□□ 0.89
PAF1Q8N7H5 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PAF1Q8N7H5 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.6■□□□□ 0.89
PAF1Q8N7H5 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.6■□□□□ 0.89
PAF1Q8N7H5 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.6■□□□□ 0.89
PAF1Q8N7H5 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.6■□□□□ 0.89
PAF1Q8N7H5 KRT17P1-201ENST00000399211 1546 ntBASIC20.6■□□□□ 0.89
PAF1Q8N7H5 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.6■□□□□ 0.89
PAF1Q8N7H5 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.6■□□□□ 0.89
PAF1Q8N7H5 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.6■□□□□ 0.89
PAF1Q8N7H5 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.6■□□□□ 0.89
PAF1Q8N7H5 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.6■□□□□ 0.89
PAF1Q8N7H5 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.6■□□□□ 0.89
PAF1Q8N7H5 AL356652.1-201ENST00000615962 565 ntBASIC20.6■□□□□ 0.89
PAF1Q8N7H5 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.6■□□□□ 0.89
PAF1Q8N7H5 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
PAF1Q8N7H5 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PAF1Q8N7H5 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PAF1Q8N7H5 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PAF1Q8N7H5 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.6■□□□□ 0.89
PAF1Q8N7H5 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PAF1Q8N7H5 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
PAF1Q8N7H5 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.6■□□□□ 0.89
PAF1Q8N7H5 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PAF1Q8N7H5 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PAF1Q8N7H5 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PAF1Q8N7H5 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.59■□□□□ 0.89
PAF1Q8N7H5 AC027702.1-201ENST00000563810 1770 ntBASIC20.59■□□□□ 0.89
PAF1Q8N7H5 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
PAF1Q8N7H5 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
PAF1Q8N7H5 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PAF1Q8N7H5 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PAF1Q8N7H5 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PAF1Q8N7H5 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.59■□□□□ 0.89
PAF1Q8N7H5 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.59■□□□□ 0.89
PAF1Q8N7H5 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.59■□□□□ 0.89
PAF1Q8N7H5 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PAF1Q8N7H5 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.59■□□□□ 0.89
PAF1Q8N7H5 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.59■□□□□ 0.89
PAF1Q8N7H5 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
PAF1Q8N7H5 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
PAF1Q8N7H5 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
PAF1Q8N7H5 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PAF1Q8N7H5 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PAF1Q8N7H5 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PAF1Q8N7H5 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.59■□□□□ 0.89
PAF1Q8N7H5 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PAF1Q8N7H5 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.59■□□□□ 0.89
PAF1Q8N7H5 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
PAF1Q8N7H5 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
PAF1Q8N7H5 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
PAF1Q8N7H5 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms