Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PHTF2Q8N3S3 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PHTF2Q8N3S3 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PHTF2Q8N3S3 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.81■□□□□ 0.92
PHTF2Q8N3S3 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PHTF2Q8N3S3 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PHTF2Q8N3S3 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PHTF2Q8N3S3 AC005829.2-201ENST00000571422 1056 ntBASIC20.81■□□□□ 0.92
PHTF2Q8N3S3 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.81■□□□□ 0.92
PHTF2Q8N3S3 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.81■□□□□ 0.92
PHTF2Q8N3S3 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PHTF2Q8N3S3 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PHTF2Q8N3S3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PHTF2Q8N3S3 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PHTF2Q8N3S3 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PHTF2Q8N3S3 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.81■□□□□ 0.92
PHTF2Q8N3S3 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PHTF2Q8N3S3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PHTF2Q8N3S3 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PHTF2Q8N3S3 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PHTF2Q8N3S3 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PHTF2Q8N3S3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PHTF2Q8N3S3 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PHTF2Q8N3S3 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PHTF2Q8N3S3 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PHTF2Q8N3S3 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PHTF2Q8N3S3 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.8■□□□□ 0.92
PHTF2Q8N3S3 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PHTF2Q8N3S3 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.8■□□□□ 0.92
PHTF2Q8N3S3 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
PHTF2Q8N3S3 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.8■□□□□ 0.92
PHTF2Q8N3S3 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.8■□□□□ 0.92
PHTF2Q8N3S3 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
PHTF2Q8N3S3 FAM197Y4-202ENST00000622692 608 ntBASIC20.8■□□□□ 0.92
PHTF2Q8N3S3 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.8■□□□□ 0.92
PHTF2Q8N3S3 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.8■□□□□ 0.92
PHTF2Q8N3S3 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
PHTF2Q8N3S3 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
PHTF2Q8N3S3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
PHTF2Q8N3S3 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PHTF2Q8N3S3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.79■□□□□ 0.92
PHTF2Q8N3S3 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
PHTF2Q8N3S3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PHTF2Q8N3S3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.79■□□□□ 0.92
PHTF2Q8N3S3 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PHTF2Q8N3S3 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PHTF2Q8N3S3 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
PHTF2Q8N3S3 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.79■□□□□ 0.92
PHTF2Q8N3S3 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
PHTF2Q8N3S3 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PHTF2Q8N3S3 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.79■□□□□ 0.92
PHTF2Q8N3S3 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PHTF2Q8N3S3 AC011484.1-201ENST00000377652 1995 ntBASIC20.79■□□□□ 0.92
PHTF2Q8N3S3 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PHTF2Q8N3S3 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
PHTF2Q8N3S3 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PHTF2Q8N3S3 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.78■□□□□ 0.92
PHTF2Q8N3S3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.78■□□□□ 0.92
PHTF2Q8N3S3 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PHTF2Q8N3S3 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
PHTF2Q8N3S3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.78■□□□□ 0.92
PHTF2Q8N3S3 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PHTF2Q8N3S3 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PHTF2Q8N3S3 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
PHTF2Q8N3S3 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PHTF2Q8N3S3 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PHTF2Q8N3S3 MTDHP1-201ENST00000605323 784 ntBASIC20.78■□□□□ 0.92
PHTF2Q8N3S3 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.78■□□□□ 0.92
PHTF2Q8N3S3 LINC01006-201ENST00000333319 2292 ntBASIC20.78■□□□□ 0.92
PHTF2Q8N3S3 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
PHTF2Q8N3S3 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PHTF2Q8N3S3 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
PHTF2Q8N3S3 AL121603.2-201ENST00000557373 2117 ntBASIC20.77■□□□□ 0.92
PHTF2Q8N3S3 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PHTF2Q8N3S3 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
PHTF2Q8N3S3 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.77■□□□□ 0.92
PHTF2Q8N3S3 Z99916.2-201ENST00000604037 246 ntBASIC20.77■□□□□ 0.92
PHTF2Q8N3S3 AC120498.8-201ENST00000614275 531 ntBASIC20.77■□□□□ 0.92
PHTF2Q8N3S3 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
PHTF2Q8N3S3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PHTF2Q8N3S3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
PHTF2Q8N3S3 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PHTF2Q8N3S3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PHTF2Q8N3S3 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PHTF2Q8N3S3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.77■□□□□ 0.91
PHTF2Q8N3S3 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.77■□□□□ 0.91
PHTF2Q8N3S3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PHTF2Q8N3S3 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.76■□□□□ 0.91
PHTF2Q8N3S3 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PHTF2Q8N3S3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PHTF2Q8N3S3 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PHTF2Q8N3S3 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PHTF2Q8N3S3 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PHTF2Q8N3S3 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.76■□□□□ 0.91
PHTF2Q8N3S3 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.76■□□□□ 0.91
PHTF2Q8N3S3 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.76■□□□□ 0.91
PHTF2Q8N3S3 AC006557.6-201ENST00000623071 864 ntBASIC20.76■□□□□ 0.91
PHTF2Q8N3S3 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PHTF2Q8N3S3 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PHTF2Q8N3S3 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms