Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.83■□□□□ 0.6
CCDC71Q8IV32 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC71Q8IV32 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CCDC71Q8IV32 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC71Q8IV32 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC71Q8IV32 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
CCDC71Q8IV32 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC71Q8IV32 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC71Q8IV32 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
CCDC71Q8IV32 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC71Q8IV32 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC71Q8IV32 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC71Q8IV32 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC71Q8IV32 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC71Q8IV32 CYP2T1P-201ENST00000432607 1285 ntBASIC18.82■□□□□ 0.6
CCDC71Q8IV32 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC71Q8IV32 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC71Q8IV32 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.82■□□□□ 0.6
CCDC71Q8IV32 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CCDC71Q8IV32 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC71Q8IV32 AC116562.4-201ENST00000641316 2276 ntBASIC18.82■□□□□ 0.6
CCDC71Q8IV32 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC71Q8IV32 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC71Q8IV32 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC71Q8IV32 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.82■□□□□ 0.6
CCDC71Q8IV32 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC71Q8IV32 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CCDC71Q8IV32 AC125437.2-201ENST00000625180 2167 ntBASIC18.82■□□□□ 0.6
CCDC71Q8IV32 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC71Q8IV32 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC71Q8IV32 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC71Q8IV32 AC068338.2-201ENST00000563278 1430 ntBASIC18.82■□□□□ 0.6
CCDC71Q8IV32 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC71Q8IV32 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC71Q8IV32 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC71Q8IV32 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC71Q8IV32 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CCDC71Q8IV32 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC71Q8IV32 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC71Q8IV32 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC71Q8IV32 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC71Q8IV32 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC71Q8IV32 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC71Q8IV32 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CCDC71Q8IV32 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
CCDC71Q8IV32 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC71Q8IV32 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
CCDC71Q8IV32 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CCDC71Q8IV32 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC71Q8IV32 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC71Q8IV32 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CCDC71Q8IV32 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC71Q8IV32 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC71Q8IV32 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC71Q8IV32 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC71Q8IV32 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC71Q8IV32 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC71Q8IV32 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC71Q8IV32 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC71Q8IV32 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC71Q8IV32 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC71Q8IV32 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC71Q8IV32 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC71Q8IV32 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC71Q8IV32 FAM201B-201ENST00000458407 597 ntBASIC18.8■□□□□ 0.6
CCDC71Q8IV32 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC71Q8IV32 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.8■□□□□ 0.6
CCDC71Q8IV32 SLC7A5P1-201ENST00000568957 537 ntBASIC18.8■□□□□ 0.6
CCDC71Q8IV32 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC71Q8IV32 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC71Q8IV32 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC71Q8IV32 AC066615.1-201ENST00000640911 628 ntBASIC18.8■□□□□ 0.6
CCDC71Q8IV32 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CCDC71Q8IV32 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC71Q8IV32 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CCDC71Q8IV32 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC71Q8IV32 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC71Q8IV32 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC71Q8IV32 AC098818.2-201ENST00000564925 2320 ntBASIC18.79■□□□□ 0.6
CCDC71Q8IV32 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC71Q8IV32 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC71Q8IV32 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC71Q8IV32 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC71Q8IV32 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CCDC71Q8IV32 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC71Q8IV32 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.79■□□□□ 0.6
CCDC71Q8IV32 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC71Q8IV32 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC71Q8IV32 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC71Q8IV32 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CCDC71Q8IV32 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC71Q8IV32 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC71Q8IV32 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC71Q8IV32 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.79■□□□□ 0.6
CCDC71Q8IV32 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CCDC71Q8IV32 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC71Q8IV32 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC71Q8IV32 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC71Q8IV32 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC71Q8IV32 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms