Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.32■□□□□ 0.52
HIST3H2AQ7L7L0 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIST3H2AQ7L7L0 AL391422.3-201ENST00000603791 2761 ntBASIC18.31■□□□□ 0.52
HIST3H2AQ7L7L0 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.31■□□□□ 0.52
HIST3H2AQ7L7L0 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.31■□□□□ 0.52
HIST3H2AQ7L7L0 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIST3H2AQ7L7L0 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIST3H2AQ7L7L0 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HIST3H2AQ7L7L0 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIST3H2AQ7L7L0 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.31■□□□□ 0.52
HIST3H2AQ7L7L0 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HIST3H2AQ7L7L0 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.31■□□□□ 0.52
HIST3H2AQ7L7L0 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.31■□□□□ 0.52
HIST3H2AQ7L7L0 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
HIST3H2AQ7L7L0 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
HIST3H2AQ7L7L0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIST3H2AQ7L7L0 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIST3H2AQ7L7L0 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIST3H2AQ7L7L0 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
HIST3H2AQ7L7L0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HIST3H2AQ7L7L0 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIST3H2AQ7L7L0 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HIST3H2AQ7L7L0 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.3■□□□□ 0.52
HIST3H2AQ7L7L0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST3H2AQ7L7L0 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
HIST3H2AQ7L7L0 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.3■□□□□ 0.52
HIST3H2AQ7L7L0 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HIST3H2AQ7L7L0 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST3H2AQ7L7L0 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
HIST3H2AQ7L7L0 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.3■□□□□ 0.52
HIST3H2AQ7L7L0 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST3H2AQ7L7L0 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST3H2AQ7L7L0 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST3H2AQ7L7L0 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST3H2AQ7L7L0 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
HIST3H2AQ7L7L0 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.3■□□□□ 0.52
HIST3H2AQ7L7L0 AC026271.2-201ENST00000428091 497 ntBASIC18.3■□□□□ 0.52
HIST3H2AQ7L7L0 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.3■□□□□ 0.52
HIST3H2AQ7L7L0 AL162412.1-201ENST00000567129 965 ntBASIC18.3■□□□□ 0.52
HIST3H2AQ7L7L0 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HIST3H2AQ7L7L0 MIR5787-201ENST00000611784 55 ntBASIC18.3■□□□□ 0.52
HIST3H2AQ7L7L0 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.3■□□□□ 0.52
HIST3H2AQ7L7L0 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST3H2AQ7L7L0 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST3H2AQ7L7L0 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST3H2AQ7L7L0 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
HIST3H2AQ7L7L0 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HIST3H2AQ7L7L0 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.3■□□□□ 0.52
HIST3H2AQ7L7L0 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST3H2AQ7L7L0 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST3H2AQ7L7L0 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HIST3H2AQ7L7L0 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.3■□□□□ 0.52
HIST3H2AQ7L7L0 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST3H2AQ7L7L0 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
HIST3H2AQ7L7L0 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST3H2AQ7L7L0 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST3H2AQ7L7L0 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST3H2AQ7L7L0 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HIST3H2AQ7L7L0 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.29■□□□□ 0.52
HIST3H2AQ7L7L0 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST3H2AQ7L7L0 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST3H2AQ7L7L0 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HIST3H2AQ7L7L0 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.29■□□□□ 0.52
HIST3H2AQ7L7L0 AC007322.4-201ENST00000509611 723 ntBASIC18.29■□□□□ 0.52
HIST3H2AQ7L7L0 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST3H2AQ7L7L0 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HIST3H2AQ7L7L0 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HIST3H2AQ7L7L0 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
HIST3H2AQ7L7L0 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
HIST3H2AQ7L7L0 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HIST3H2AQ7L7L0 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.29■□□□□ 0.52
HIST3H2AQ7L7L0 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST3H2AQ7L7L0 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST3H2AQ7L7L0 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST3H2AQ7L7L0 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST3H2AQ7L7L0 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.28■□□□□ 0.52
HIST3H2AQ7L7L0 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST3H2AQ7L7L0 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST3H2AQ7L7L0 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST3H2AQ7L7L0 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.28■□□□□ 0.52
HIST3H2AQ7L7L0 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.28■□□□□ 0.52
HIST3H2AQ7L7L0 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HIST3H2AQ7L7L0 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HIST3H2AQ7L7L0 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.28■□□□□ 0.52
HIST3H2AQ7L7L0 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
HIST3H2AQ7L7L0 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.28■□□□□ 0.52
HIST3H2AQ7L7L0 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.28■□□□□ 0.52
HIST3H2AQ7L7L0 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.28■□□□□ 0.52
HIST3H2AQ7L7L0 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST3H2AQ7L7L0 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST3H2AQ7L7L0 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST3H2AQ7L7L0 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST3H2AQ7L7L0 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HIST3H2AQ7L7L0 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.27■□□□□ 0.52
HIST3H2AQ7L7L0 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
HIST3H2AQ7L7L0 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HIST3H2AQ7L7L0 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HIST3H2AQ7L7L0 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
HIST3H2AQ7L7L0 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HIST3H2AQ7L7L0 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms