Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST2H3AQ71DI3 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIST2H3AQ71DI3 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIST2H3AQ71DI3 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIST2H3AQ71DI3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIST2H3AQ71DI3 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIST2H3AQ71DI3 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIST2H3AQ71DI3 KRT18P68-201ENST00000392293 1000 ntBASIC17.67■□□□□ 0.42
HIST2H3AQ71DI3 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.67■□□□□ 0.42
HIST2H3AQ71DI3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.67■□□□□ 0.42
HIST2H3AQ71DI3 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HIST2H3AQ71DI3 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HIST2H3AQ71DI3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.67■□□□□ 0.42
HIST2H3AQ71DI3 AC080038.1-201ENST00000611274 1154 ntBASIC17.67■□□□□ 0.42
HIST2H3AQ71DI3 AC008694.1-202ENST00000636953 945 ntBASIC17.67■□□□□ 0.42
HIST2H3AQ71DI3 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.67■□□□□ 0.42
HIST2H3AQ71DI3 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
HIST2H3AQ71DI3 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.67■□□□□ 0.42
HIST2H3AQ71DI3 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.67■□□□□ 0.42
HIST2H3AQ71DI3 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIST2H3AQ71DI3 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.67■□□□□ 0.42
HIST2H3AQ71DI3 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.67■□□□□ 0.42
HIST2H3AQ71DI3 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
HIST2H3AQ71DI3 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.66■□□□□ 0.42
HIST2H3AQ71DI3 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
HIST2H3AQ71DI3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIST2H3AQ71DI3 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HIST2H3AQ71DI3 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HIST2H3AQ71DI3 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.66■□□□□ 0.42
HIST2H3AQ71DI3 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.66■□□□□ 0.42
HIST2H3AQ71DI3 CYP2T3P-201ENST00000601990 817 ntBASIC17.66■□□□□ 0.42
HIST2H3AQ71DI3 AC105020.6-201ENST00000621523 1217 ntBASIC17.66■□□□□ 0.42
HIST2H3AQ71DI3 AC073111.5-205ENST00000641717 521 ntBASIC17.66■□□□□ 0.42
HIST2H3AQ71DI3 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.66■□□□□ 0.42
HIST2H3AQ71DI3 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.66■□□□□ 0.42
HIST2H3AQ71DI3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.66■□□□□ 0.42
HIST2H3AQ71DI3 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIST2H3AQ71DI3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.66■□□□□ 0.42
HIST2H3AQ71DI3 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIST2H3AQ71DI3 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.66■□□□□ 0.42
HIST2H3AQ71DI3 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HIST2H3AQ71DI3 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIST2H3AQ71DI3 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIST2H3AQ71DI3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIST2H3AQ71DI3 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
HIST2H3AQ71DI3 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HIST2H3AQ71DI3 AC010980.2-201ENST00000587099 1412 ntBASIC17.65■□□□□ 0.42
HIST2H3AQ71DI3 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
HIST2H3AQ71DI3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
HIST2H3AQ71DI3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HIST2H3AQ71DI3 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
HIST2H3AQ71DI3 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.65■□□□□ 0.42
HIST2H3AQ71DI3 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
HIST2H3AQ71DI3 AC005181.1-201ENST00000604782 1256 ntBASIC17.65■□□□□ 0.42
HIST2H3AQ71DI3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.65■□□□□ 0.42
HIST2H3AQ71DI3 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
HIST2H3AQ71DI3 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.65■□□□□ 0.42
HIST2H3AQ71DI3 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HIST2H3AQ71DI3 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HIST2H3AQ71DI3 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HIST2H3AQ71DI3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.65■□□□□ 0.42
HIST2H3AQ71DI3 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HIST2H3AQ71DI3 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HIST2H3AQ71DI3 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.65■□□□□ 0.42
HIST2H3AQ71DI3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
HIST2H3AQ71DI3 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
HIST2H3AQ71DI3 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.64■□□□□ 0.42
HIST2H3AQ71DI3 TCF3P1-201ENST00000423021 1937 ntBASIC17.64■□□□□ 0.42
HIST2H3AQ71DI3 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
HIST2H3AQ71DI3 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
HIST2H3AQ71DI3 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
HIST2H3AQ71DI3 AL391422.3-201ENST00000603791 2761 ntBASIC17.64■□□□□ 0.41
HIST2H3AQ71DI3 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HIST2H3AQ71DI3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.64■□□□□ 0.41
HIST2H3AQ71DI3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.64■□□□□ 0.41
HIST2H3AQ71DI3 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HIST2H3AQ71DI3 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HIST2H3AQ71DI3 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HIST2H3AQ71DI3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.64■□□□□ 0.41
HIST2H3AQ71DI3 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.64■□□□□ 0.41
HIST2H3AQ71DI3 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HIST2H3AQ71DI3 CDCA4P2-201ENST00000441182 718 ntBASIC17.64■□□□□ 0.41
HIST2H3AQ71DI3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.64■□□□□ 0.41
HIST2H3AQ71DI3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.64■□□□□ 0.41
HIST2H3AQ71DI3 AC133552.2-202ENST00000575694 574 ntBASIC17.64■□□□□ 0.41
HIST2H3AQ71DI3 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.64■□□□□ 0.41
HIST2H3AQ71DI3 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HIST2H3AQ71DI3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HIST2H3AQ71DI3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.64■□□□□ 0.41
HIST2H3AQ71DI3 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.64■□□□□ 0.41
HIST2H3AQ71DI3 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.64■□□□□ 0.41
HIST2H3AQ71DI3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HIST2H3AQ71DI3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.64■□□□□ 0.41
HIST2H3AQ71DI3 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.63■□□□□ 0.41
HIST2H3AQ71DI3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.63■□□□□ 0.41
HIST2H3AQ71DI3 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HIST2H3AQ71DI3 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
HIST2H3AQ71DI3 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.63■□□□□ 0.41
HIST2H3AQ71DI3 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIST2H3AQ71DI3 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms