Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTCHD4Q6ZW05 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
PTCHD4Q6ZW05 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTCHD4Q6ZW05 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTCHD4Q6ZW05 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTCHD4Q6ZW05 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
PTCHD4Q6ZW05 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PTCHD4Q6ZW05 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTCHD4Q6ZW05 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.54
PTCHD4Q6ZW05 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.54
PTCHD4Q6ZW05 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
PTCHD4Q6ZW05 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTCHD4Q6ZW05 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
PTCHD4Q6ZW05 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PTCHD4Q6ZW05 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTCHD4Q6ZW05 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.45■□□□□ 0.54
PTCHD4Q6ZW05 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTCHD4Q6ZW05 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTCHD4Q6ZW05 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTCHD4Q6ZW05 LINC02228-203ENST00000641970 1355 ntBASIC18.45■□□□□ 0.54
PTCHD4Q6ZW05 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PTCHD4Q6ZW05 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTCHD4Q6ZW05 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTCHD4Q6ZW05 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTCHD4Q6ZW05 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.45■□□□□ 0.54
PTCHD4Q6ZW05 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.45■□□□□ 0.54
PTCHD4Q6ZW05 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTCHD4Q6ZW05 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTCHD4Q6ZW05 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PTCHD4Q6ZW05 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.45■□□□□ 0.54
PTCHD4Q6ZW05 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.45■□□□□ 0.54
PTCHD4Q6ZW05 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTCHD4Q6ZW05 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
PTCHD4Q6ZW05 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.45■□□□□ 0.54
PTCHD4Q6ZW05 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.45■□□□□ 0.54
PTCHD4Q6ZW05 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTCHD4Q6ZW05 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.44■□□□□ 0.54
PTCHD4Q6ZW05 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PTCHD4Q6ZW05 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
PTCHD4Q6ZW05 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PTCHD4Q6ZW05 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.44■□□□□ 0.54
PTCHD4Q6ZW05 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PTCHD4Q6ZW05 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTCHD4Q6ZW05 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
PTCHD4Q6ZW05 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
PTCHD4Q6ZW05 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTCHD4Q6ZW05 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.44■□□□□ 0.54
PTCHD4Q6ZW05 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.44■□□□□ 0.54
PTCHD4Q6ZW05 AC010141.2-201ENST00000452426 721 ntBASIC18.44■□□□□ 0.54
PTCHD4Q6ZW05 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTCHD4Q6ZW05 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
PTCHD4Q6ZW05 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTCHD4Q6ZW05 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.44■□□□□ 0.54
PTCHD4Q6ZW05 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PTCHD4Q6ZW05 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTCHD4Q6ZW05 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTCHD4Q6ZW05 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTCHD4Q6ZW05 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.43■□□□□ 0.54
PTCHD4Q6ZW05 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
PTCHD4Q6ZW05 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTCHD4Q6ZW05 KRT16P2-201ENST00000414673 1423 ntBASIC18.43■□□□□ 0.54
PTCHD4Q6ZW05 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTCHD4Q6ZW05 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTCHD4Q6ZW05 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
PTCHD4Q6ZW05 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.43■□□□□ 0.54
PTCHD4Q6ZW05 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PTCHD4Q6ZW05 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTCHD4Q6ZW05 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.43■□□□□ 0.54
PTCHD4Q6ZW05 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PTCHD4Q6ZW05 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.43■□□□□ 0.54
PTCHD4Q6ZW05 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PTCHD4Q6ZW05 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTCHD4Q6ZW05 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTCHD4Q6ZW05 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PTCHD4Q6ZW05 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PTCHD4Q6ZW05 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTCHD4Q6ZW05 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PTCHD4Q6ZW05 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTCHD4Q6ZW05 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTCHD4Q6ZW05 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTCHD4Q6ZW05 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.42■□□□□ 0.54
PTCHD4Q6ZW05 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PTCHD4Q6ZW05 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
PTCHD4Q6ZW05 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.42■□□□□ 0.54
PTCHD4Q6ZW05 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.42■□□□□ 0.54
PTCHD4Q6ZW05 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.42■□□□□ 0.54
PTCHD4Q6ZW05 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PTCHD4Q6ZW05 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.42■□□□□ 0.54
PTCHD4Q6ZW05 AC104187.1-201ENST00000607510 612 ntBASIC18.42■□□□□ 0.54
PTCHD4Q6ZW05 MIR2861-201ENST00000636310 90 ntBASIC18.42■□□□□ 0.54
PTCHD4Q6ZW05 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PTCHD4Q6ZW05 AP000974.1-201ENST00000623909 2387 ntBASIC18.42■□□□□ 0.54
PTCHD4Q6ZW05 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTCHD4Q6ZW05 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.42■□□□□ 0.54
PTCHD4Q6ZW05 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PTCHD4Q6ZW05 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTCHD4Q6ZW05 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PTCHD4Q6ZW05 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTCHD4Q6ZW05 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTCHD4Q6ZW05 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms