Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
RNF111Q6ZNA4 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
RNF111Q6ZNA4 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.51■□□□□ 0.71
RNF111Q6ZNA4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF111Q6ZNA4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
RNF111Q6ZNA4 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.51■□□□□ 0.71
RNF111Q6ZNA4 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF111Q6ZNA4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF111Q6ZNA4 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF111Q6ZNA4 SLC7A5P2-201ENST00000553010 536 ntBASIC19.51■□□□□ 0.71
RNF111Q6ZNA4 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF111Q6ZNA4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF111Q6ZNA4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.51■□□□□ 0.71
RNF111Q6ZNA4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
RNF111Q6ZNA4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF111Q6ZNA4 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF111Q6ZNA4 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF111Q6ZNA4 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF111Q6ZNA4 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
RNF111Q6ZNA4 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF111Q6ZNA4 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
RNF111Q6ZNA4 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF111Q6ZNA4 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF111Q6ZNA4 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF111Q6ZNA4 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF111Q6ZNA4 KRT16P2-201ENST00000414673 1423 ntBASIC19.51■□□□□ 0.71
RNF111Q6ZNA4 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
RNF111Q6ZNA4 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.5■□□□□ 0.71
RNF111Q6ZNA4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.5■□□□□ 0.71
RNF111Q6ZNA4 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF111Q6ZNA4 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
RNF111Q6ZNA4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF111Q6ZNA4 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF111Q6ZNA4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
RNF111Q6ZNA4 AC006015.1-201ENST00000429970 570 ntBASIC19.5■□□□□ 0.71
RNF111Q6ZNA4 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.5■□□□□ 0.71
RNF111Q6ZNA4 AL137784.2-201ENST00000607332 1000 ntBASIC19.5■□□□□ 0.71
RNF111Q6ZNA4 IKBKGP1-201ENST00000612193 1073 ntBASIC19.5■□□□□ 0.71
RNF111Q6ZNA4 AC092666.2-201ENST00000613287 246 ntBASIC19.5■□□□□ 0.71
RNF111Q6ZNA4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF111Q6ZNA4 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF111Q6ZNA4 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.5■□□□□ 0.71
RNF111Q6ZNA4 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
RNF111Q6ZNA4 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
RNF111Q6ZNA4 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF111Q6ZNA4 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF111Q6ZNA4 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF111Q6ZNA4 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF111Q6ZNA4 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF111Q6ZNA4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF111Q6ZNA4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF111Q6ZNA4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF111Q6ZNA4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RNF111Q6ZNA4 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF111Q6ZNA4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RNF111Q6ZNA4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RNF111Q6ZNA4 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF111Q6ZNA4 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.49■□□□□ 0.71
RNF111Q6ZNA4 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF111Q6ZNA4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.49■□□□□ 0.71
RNF111Q6ZNA4 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
RNF111Q6ZNA4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.49■□□□□ 0.71
RNF111Q6ZNA4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.49■□□□□ 0.71
RNF111Q6ZNA4 MYCNOS-205ENST00000641950 531 ntBASIC19.49■□□□□ 0.71
RNF111Q6ZNA4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF111Q6ZNA4 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF111Q6ZNA4 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.49■□□□□ 0.71
RNF111Q6ZNA4 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF111Q6ZNA4 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RNF111Q6ZNA4 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF111Q6ZNA4 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF111Q6ZNA4 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF111Q6ZNA4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF111Q6ZNA4 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RNF111Q6ZNA4 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF111Q6ZNA4 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF111Q6ZNA4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RNF111Q6ZNA4 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.48■□□□□ 0.71
RNF111Q6ZNA4 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
RNF111Q6ZNA4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.48■□□□□ 0.71
RNF111Q6ZNA4 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.48■□□□□ 0.71
RNF111Q6ZNA4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF111Q6ZNA4 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF111Q6ZNA4 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RNF111Q6ZNA4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RNF111Q6ZNA4 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.48■□□□□ 0.71
RNF111Q6ZNA4 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF111Q6ZNA4 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.48■□□□□ 0.71
RNF111Q6ZNA4 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF111Q6ZNA4 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RNF111Q6ZNA4 LETM1P2-201ENST00000597330 2178 ntBASIC19.47■□□□□ 0.71
RNF111Q6ZNA4 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.47■□□□□ 0.71
RNF111Q6ZNA4 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF111Q6ZNA4 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.47■□□□□ 0.71
RNF111Q6ZNA4 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RNF111Q6ZNA4 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RNF111Q6ZNA4 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.47■□□□□ 0.71
RNF111Q6ZNA4 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RNF111Q6ZNA4 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF111Q6ZNA4 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms