Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NHLRC1Q6VVB1 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.07■□□□□ 0.48
NHLRC1Q6VVB1 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
NHLRC1Q6VVB1 CYP2T3P-201ENST00000601990 817 ntBASIC18.07■□□□□ 0.48
NHLRC1Q6VVB1 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
NHLRC1Q6VVB1 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.07■□□□□ 0.48
NHLRC1Q6VVB1 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
NHLRC1Q6VVB1 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NHLRC1Q6VVB1 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
NHLRC1Q6VVB1 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NHLRC1Q6VVB1 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.07■□□□□ 0.48
NHLRC1Q6VVB1 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.07■□□□□ 0.48
NHLRC1Q6VVB1 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NHLRC1Q6VVB1 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NHLRC1Q6VVB1 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NHLRC1Q6VVB1 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NHLRC1Q6VVB1 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
NHLRC1Q6VVB1 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NHLRC1Q6VVB1 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NHLRC1Q6VVB1 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NHLRC1Q6VVB1 PGM5P4-201ENST00000421970 445 ntBASIC18.06■□□□□ 0.48
NHLRC1Q6VVB1 AL355472.2-201ENST00000422958 438 ntBASIC18.06■□□□□ 0.48
NHLRC1Q6VVB1 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.06■□□□□ 0.48
NHLRC1Q6VVB1 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.06■□□□□ 0.48
NHLRC1Q6VVB1 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.06■□□□□ 0.48
NHLRC1Q6VVB1 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NHLRC1Q6VVB1 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NHLRC1Q6VVB1 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.06■□□□□ 0.48
NHLRC1Q6VVB1 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
NHLRC1Q6VVB1 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NHLRC1Q6VVB1 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.05■□□□□ 0.48
NHLRC1Q6VVB1 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
NHLRC1Q6VVB1 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NHLRC1Q6VVB1 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.05■□□□□ 0.48
NHLRC1Q6VVB1 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NHLRC1Q6VVB1 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NHLRC1Q6VVB1 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
NHLRC1Q6VVB1 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
NHLRC1Q6VVB1 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.05■□□□□ 0.48
NHLRC1Q6VVB1 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NHLRC1Q6VVB1 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.05■□□□□ 0.48
NHLRC1Q6VVB1 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.05■□□□□ 0.48
NHLRC1Q6VVB1 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
NHLRC1Q6VVB1 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NHLRC1Q6VVB1 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
NHLRC1Q6VVB1 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.05■□□□□ 0.48
NHLRC1Q6VVB1 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.04■□□□□ 0.48
NHLRC1Q6VVB1 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.04■□□□□ 0.48
NHLRC1Q6VVB1 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.04■□□□□ 0.48
NHLRC1Q6VVB1 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.04■□□□□ 0.48
NHLRC1Q6VVB1 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NHLRC1Q6VVB1 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.04■□□□□ 0.48
NHLRC1Q6VVB1 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.04■□□□□ 0.48
NHLRC1Q6VVB1 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.04■□□□□ 0.48
NHLRC1Q6VVB1 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.04■□□□□ 0.48
NHLRC1Q6VVB1 AC092666.2-201ENST00000613287 246 ntBASIC18.04■□□□□ 0.48
NHLRC1Q6VVB1 AC008694.1-202ENST00000636953 945 ntBASIC18.04■□□□□ 0.48
NHLRC1Q6VVB1 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
NHLRC1Q6VVB1 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NHLRC1Q6VVB1 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
NHLRC1Q6VVB1 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NHLRC1Q6VVB1 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.04■□□□□ 0.48
NHLRC1Q6VVB1 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.04■□□□□ 0.48
NHLRC1Q6VVB1 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NHLRC1Q6VVB1 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NHLRC1Q6VVB1 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NHLRC1Q6VVB1 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.03■□□□□ 0.48
NHLRC1Q6VVB1 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NHLRC1Q6VVB1 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.03■□□□□ 0.48
NHLRC1Q6VVB1 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NHLRC1Q6VVB1 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NHLRC1Q6VVB1 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.03■□□□□ 0.48
NHLRC1Q6VVB1 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NHLRC1Q6VVB1 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NHLRC1Q6VVB1 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NHLRC1Q6VVB1 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.03■□□□□ 0.48
NHLRC1Q6VVB1 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NHLRC1Q6VVB1 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NHLRC1Q6VVB1 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NHLRC1Q6VVB1 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NHLRC1Q6VVB1 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.03■□□□□ 0.48
NHLRC1Q6VVB1 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.03■□□□□ 0.48
NHLRC1Q6VVB1 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NHLRC1Q6VVB1 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NHLRC1Q6VVB1 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.03■□□□□ 0.48
NHLRC1Q6VVB1 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NHLRC1Q6VVB1 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
NHLRC1Q6VVB1 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
NHLRC1Q6VVB1 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
NHLRC1Q6VVB1 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.03■□□□□ 0.48
NHLRC1Q6VVB1 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
NHLRC1Q6VVB1 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
NHLRC1Q6VVB1 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NHLRC1Q6VVB1 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NHLRC1Q6VVB1 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NHLRC1Q6VVB1 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NHLRC1Q6VVB1 AC099778.1-201ENST00000568593 1911 ntBASIC18.02■□□□□ 0.48
NHLRC1Q6VVB1 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NHLRC1Q6VVB1 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NHLRC1Q6VVB1 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms